STRINGSTRING
Tb10.389.1790 Tb10.389.1790 Tb11.01.5500 Tb11.01.5500 Tb11.01.2630 Tb11.01.2630 Tb11.01.2250 Tb11.01.2250 Tb11.01.0820 Tb11.01.0820 Tb11.01.0490 Tb11.01.0490 Tb11.02.4620 Tb11.02.4620 Tb11.02.0380 Tb11.02.0380 Tb11.03.0050 Tb11.03.0050 Tb11.03.0680 Tb11.03.0680 Tb10.61.0490 Tb10.61.0490 Tb10.61.1030 Tb10.61.1030 Tb10.61.1920 Tb10.61.1920 Tb10.61.2040 Tb10.61.2040 Tb10.61.2440 Tb10.61.2440 Tb10.389.1290 Tb10.389.1290 Tb10.6k15.0270 Tb10.6k15.0270 Tb10.6k15.0360 Tb10.6k15.0360 Tb10.6k15.2320 Tb10.6k15.2320 Tb10.6k15.2890 Tb10.6k15.2890 Tb10.6k15.3160 Tb10.6k15.3160 Tb10.70.4960 Tb10.70.4960 Tb09.244.2650 Tb09.244.2650 Tb09.244.2790 Tb09.244.2790 Tb09.211.2550 Tb09.211.2550 Tb09.211.0180 Tb09.211.0180 Tb09.160.3820 Tb09.160.3820 Tb09.160.2550 Tb09.160.2550 Tb09.160.2490 Tb09.160.2490 TB927.1.1370 TB927.1.1370 Tb927.8.5040 Tb927.8.5040 Tb927.7.4220 Tb927.7.4220 Tb927.7.700 Tb927.7.700 Tb927.8.2970 Tb927.8.2970 Tb927.3.3590 Tb927.3.3590 Tb927.3.3950 Tb927.3.3950 Tb927.7.3380 Tb927.7.3380 Tb927.8.5490 Tb927.8.5490 Tb927.8.2600 Tb927.8.2600 Tb927.4.4170 Tb927.4.4170 Tb927.8.1410 Tb927.8.1410 Tb927.8.3750 Tb927.8.3750 Tb927.4.3850 Tb927.4.3850 Tb927.6.2840 Tb927.6.2840 Tb927.6.2780 Tb927.6.2780 Tb927.6.2050 Tb927.6.2050 Tb927.4.3670 Tb927.4.3670 Tb927.6.1900 Tb927.6.1900 Tb927.2.4550 Tb927.2.4550 Tb927.2.4980 Tb927.2.4980 Tb927.2.2950 Tb927.2.2950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb10.389.179060S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (215 aa)
Tb11.01.5500U3 small nucleolar ribonucleoprotein protein IMP3, putative. (226 aa)
Tb11.01.2630Uncharacterized protein; Belongs to the NOB1 family. (432 aa)
Tb11.01.2250Uncharacterized protein. (975 aa)
Tb11.01.0820Uncharacterized protein. (1216 aa)
Tb11.01.0490Sas10 domain-containing protein. (523 aa)
Tb11.02.4620Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (781 aa)
Tb11.02.0380WD_REPEATS_REGION domain-containing protein. (769 aa)
Tb11.03.0050RNA processing factor 1, putative. (331 aa)
Tb11.03.0680Uncharacterized protein. (948 aa)
Tb10.61.0490PINc domain-containing protein. (207 aa)
Tb10.61.1030U3 snoRNA-associated protein UTP11, putative. (346 aa)
Tb10.61.1920Fibrillarin, putative. (304 aa)
Tb10.61.2040Fibrillarin, putative. (228 aa)
Tb10.61.2440Uncharacterized protein. (1040 aa)
Tb10.389.1290Uncharacterized protein. (649 aa)
Tb10.6k15.0270Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (226 aa)
Tb10.6k15.0360Uncharacterized protein. (410 aa)
Tb10.6k15.2320Uncharacterized protein. (269 aa)
Tb10.6k15.289040S ribosomal protein S8, putative. (260 aa)
Tb10.6k15.3160Fibrillarin. (300 aa)
Tb10.70.4960WD_REPEATS_REGION domain-containing protein. (696 aa)
Tb09.244.2650Uncharacterized protein. (897 aa)
Tb09.244.2790rRNA processing protein, putative. (251 aa)
Tb09.211.2550WD_REPEATS_REGION domain-containing protein. (444 aa)
Tb09.211.0180Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (658 aa)
Tb09.160.3820Nucleolar RNA binding protein, putative. (501 aa)
Tb09.160.255040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
Tb09.160.249040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
TB927.1.1370rRNA biogenesis protein, putative. (679 aa)
Tb927.8.5040Uncharacterized protein. (278 aa)
Tb927.7.4220Uncharacterized protein. (1110 aa)
Tb927.7.700Uncharacterized protein. (666 aa)
Tb927.8.2970Uncharacterized protein. (304 aa)
Tb927.3.3590U3 small nucleolar ribonucleoprotein protein MPP10, putative. (672 aa)
Tb927.3.3950Uncharacterized protein. (550 aa)
Tb927.7.3380Protein MAK16 homolog; Belongs to the MAK16 family. (276 aa)
Tb927.8.5490Uncharacterized protein. (623 aa)
Tb927.8.2600WD_REPEATS_REGION domain-containing protein. (646 aa)
Tb927.4.4170rRNA methyltransferase, putative. (284 aa)
Tb927.8.1410Uncharacterized protein. (777 aa)
Tb927.8.3750Nucleolar protein, putative. (483 aa)
Tb927.4.3850WD_REPEATS_REGION domain-containing protein. (453 aa)
Tb927.6.2840RIO domain-containing protein. (478 aa)
Tb927.6.2780U3 small nuclear ribonucleoprotein (SnRNP), putative. (287 aa)
Tb927.6.2050Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (213 aa)
Tb927.4.3670CBF domain-containing protein. (457 aa)
Tb927.6.1900Bystin, putative. (475 aa)
Tb927.2.4550Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (905 aa)
Tb927.2.4980Uncharacterized protein. (279 aa)
Tb927.2.2950Uncharacterized protein. (980 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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