STRINGSTRING
Tb927.5.1200 Tb927.5.1200 Tb927.2.2180 Tb927.2.2180 Tb11.01.8320 Tb11.01.8320 Tb11.01.2820 Tb11.01.2820 Tb11.01.0260 Tb11.01.0260 Tb11.02.5380 Tb11.02.5380 Tb927.7.4670 Tb927.7.4670 Tb927.2.3620 Tb927.2.3620 Tb927.6.670 Tb927.6.670 Tb927.4.1990 Tb927.4.1990 Tb927.4.1630 Tb927.4.1630 Tb10.6k15.3210 Tb10.6k15.3210 Tb09.160.5280 Tb09.160.5280 Tb09.160.5160 Tb09.160.5160 TbEAP1 TbEAP1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb927.5.1200Exosome component CSL4. (309 aa)
Tb927.2.2180Ribosomal RNA processing protein 41B. (256 aa)
Tb11.01.8320Exosome-associated protein 2. (294 aa)
Tb11.01.2820Exosome-associated protein 4. (227 aa)
Tb11.01.0260Exosome complex exonuclease RRP44, putative; Belongs to the RNR ribonuclease family. (895 aa)
Tb11.02.5380Exosome complex exonuclease RRP44p homologue; Belongs to the RNR ribonuclease family. (972 aa)
Tb927.7.4670Ribosomal RNA processing protein 4. (324 aa)
Tb927.2.3620GTP-binding elongation factor Tu family, putative. (805 aa)
Tb927.6.670Ribosomal RNA processing protein 45. (363 aa)
Tb927.4.1990RNA helicase, putative. (626 aa)
Tb927.4.1630Ribosomal RNA processing protein 6. (736 aa)
Tb10.6k15.3210Exosome complex exonuclease RRP41A. (252 aa)
Tb09.160.5280Mitochondrial exoribonuclease DSS-1. (743 aa)
Tb09.160.5160Exosome complex exonuclease RRP40. (304 aa)
TbEAP1RNasePH-like protein exosome-associated protein 1 Rrp42 homologue. (397 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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