STRINGSTRING
Tb11.02.0740 Tb11.02.0740 Tb927.2.2180 Tb927.2.2180 Tb11.01.8320 Tb11.01.8320 Tb11.01.7680 Tb11.01.7680 Tb11.01.6830 Tb11.01.6830 Tb11.01.5500 Tb11.01.5500 Tb11.01.5370 Tb11.01.5370 Tb11.01.3675 Tb11.01.3675 Tb11.01.2820 Tb11.01.2820 Tb11.01.2630 Tb11.01.2630 Tb11.01.2250 Tb11.01.2250 Tb11.01.1480 Tb11.01.1480 Tb11.01.1475 Tb11.01.1475 Tb11.01.0820 Tb11.01.0820 Tb11.01.0280 Tb11.01.0280 Tb11.01.0355 Tb11.01.0355 Tb11.01.0490 Tb11.01.0490 Tb11.02.4620 Tb11.02.4620 Tb11.02.3160 Tb11.02.3160 Tb10.61.2090 Tb10.61.2090 Tb11.02.1085 Tb11.02.1085 Tb11.02.0380 Tb11.02.0380 Tb11.02.0240 Tb11.02.0240 Tb11.55.0025 Tb11.55.0025 Tb11.03.0680 Tb11.03.0680 Tb10.61.0490 Tb10.61.0490 Tb10.61.1030 Tb10.61.1030 Tb10.61.1780 Tb10.61.1780 Tb10.61.1920 Tb10.61.1920 Tb10.61.1960 Tb10.61.1960 Tb10.61.2040 Tb10.61.2040 Tb10.61.2440 Tb10.61.2440 Tb10.389.0160 Tb10.389.0160 Tb10.389.0280 Tb10.389.0280 Tb10.389.0910 Tb10.389.0910 Tb10.389.1790 Tb10.389.1790 Tb10.26.0370 Tb10.26.0370 Tb10.406.0540 Tb10.406.0540 Tb10.6k15.0360 Tb10.6k15.0360 Tb10.6k15.3160 Tb10.6k15.3160 Tb10.6k15.3210 Tb10.6k15.3210 Tb10.6k15.3220 Tb10.6k15.3220 Tb10.6k15.3340 Tb10.6k15.3340 Tb10.70.0230 Tb10.70.0230 Tb10.100.0110 Tb10.100.0110 Tb10.70.0540 Tb10.70.0540 Tb10.70.0610 Tb10.70.0610 Tb10.70.1730 Tb10.70.1730 Tb10.70.3360 Tb10.70.3360 Tb10.70.3370 Tb10.70.3370 Tb10.70.3570 Tb10.70.3570 Tb10.70.4960 Tb10.70.4960 Tb10.70.7020 Tb10.70.7020 Tb10.70.7695 Tb10.70.7695 Tb10.100.0080 Tb10.100.0080 Tb09.244.2630 Tb09.244.2630 Tb09.244.2650 Tb09.244.2650 Tb09.244.2790 Tb09.244.2790 Tb09.211.4870 Tb09.211.4870 Tb09.211.3800 Tb09.211.3800 Tb09.211.3670 Tb09.211.3670 Tb09.211.2550 Tb09.211.2550 Tb09.211.0110 Tb09.211.0110 Tb09.211.0180 Tb09.211.0180 Tb09.160.5160 Tb09.160.5160 Tb09.160.4450 Tb09.160.4450 Tb09.160.3820 Tb09.160.3820 Tb09.160.3670 Tb09.160.3670 Tb09.160.2550 Tb09.160.2550 Tb09.160.2490 Tb09.160.2490 Tb09.160.1560 Tb09.160.1560 TB927.1.3180 TB927.1.3180 TbEAP1 TbEAP1 TB927.1.1370 TB927.1.1370 TB927.1.560 TB927.1.560 Tb927.8.6560 Tb927.8.6560 Tb927.7.230 Tb927.7.230 Tb927.5.3850 Tb927.5.3850 Tb927.8.5040 Tb927.8.5040 Tb927.7.4220 Tb927.7.4220 Tb927.7.4340 Tb927.7.4340 Tb927.5.1200 Tb927.5.1200 Tb927.8.1260 Tb927.8.1260 Tb10.70.1380 Tb10.70.1380 Tb927.7.1040 Tb927.7.1040 Tb927.8.2810 Tb927.8.2810 Tb927.3.3590 Tb927.3.3590 Tb927.3.3950 Tb927.3.3950 Tb927.8.5490 Tb927.8.5490 Tb927.7.4670 Tb927.7.4670 Tb927.8.2600 Tb927.8.2600 Tb927.8.2500 Tb927.8.2500 Tb927.7.2340 Tb927.7.2340 Tb927.4.4170 Tb927.4.4170 Tb927.8.5820 Tb927.8.5820 Tb927.8.6150 Tb927.8.6150 Tb927.7.5120 Tb927.7.5120 Tb927.5.2800 Tb927.5.2800 Tb927.8.1410 Tb927.8.1410 Tb11.02.4000 Tb11.02.4000 Tb927.3.5400 Tb927.3.5400 Tb927.3.5150 Tb927.3.5150 Tb927.3.5140 Tb927.3.5140 Tb927.3.5130 Tb927.3.5130 Tb927.8.3750 Tb927.8.3750 Tb927.4.1630 Tb927.4.1630 Tb927.8.1980 Tb927.8.1980 Tb927.5.2530 Tb927.5.2530 Tb927.4.3850 Tb927.4.3850 Tb927.4.2040 Tb927.4.2040 Tb927.4.2030 Tb927.4.2030 Tb927.4.1900 Tb927.4.1900 Tb927.4.1860 Tb927.4.1860 Tb927.6.2840 Tb927.6.2840 Tb927.6.2780 Tb927.6.2780 Tb927.6.670 Tb927.6.670 Tb927.4.3670 Tb927.4.3670 Tb927.6.1900 Tb927.6.1900 Tb10.61.1390 Tb10.61.1390 Tb927.2.4550 Tb927.2.4550 Tb927.2.4980 Tb927.2.4980 Tb927.6.4350 Tb927.6.4350 Tb927.6.4600 Tb927.6.4600 Tb927.2.2950 Tb927.2.2950
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tb11.02.074060S ribosomal protein L44; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
Tb927.2.2180Ribosomal RNA processing protein 41B. (256 aa)
Tb11.01.8320Exosome-associated protein 2. (294 aa)
Tb11.01.7680RNA-binding protein, putative. (433 aa)
Tb11.01.6830Probable ribosome biogenesis protein Tb11.01.6830; Probable pre-rRNA processing protein involved in ribosome biogenesis. (264 aa)
Tb11.01.5500U3 small nucleolar ribonucleoprotein protein IMP3, putative. (226 aa)
Tb11.01.5370ATP-dependent DEAD/H RNA helicase, putative. (556 aa)
Tb11.01.367540S ribosomal protein S17, putative. (142 aa)
Tb11.01.2820Exosome-associated protein 4. (227 aa)
Tb11.01.2630Uncharacterized protein; Belongs to the NOB1 family. (432 aa)
Tb11.01.2250Uncharacterized protein. (975 aa)
Tb11.01.148060S ribosomal protein L34, putative. (170 aa)
Tb11.01.147540S ribosomal protein S27, putative. (86 aa)
Tb11.01.0820Uncharacterized protein. (1216 aa)
Tb11.01.0280WD_REPEATS_REGION domain-containing protein. (805 aa)
Tb11.01.035540S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (111 aa)
Tb11.01.0490Sas10 domain-containing protein. (523 aa)
Tb11.02.4620Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (781 aa)
Tb11.02.3160Phosphotransferase, putative. (540 aa)
Tb10.61.209060S ribosomal protein L17, putative; Belongs to the universal ribosomal protein uL22 family. (166 aa)
Tb11.02.108540S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (273 aa)
Tb11.02.0380WD_REPEATS_REGION domain-containing protein. (769 aa)
Tb11.02.0240GTP-binding protein, putative. (486 aa)
Tb11.55.0025XRN_N domain-containing protein. (524 aa)
Tb11.03.0680Uncharacterized protein. (948 aa)
Tb10.61.0490PINc domain-containing protein. (207 aa)
Tb10.61.1030U3 snoRNA-associated protein UTP11, putative. (346 aa)
Tb10.61.1780Uncharacterized protein. (681 aa)
Tb10.61.1920Fibrillarin, putative. (304 aa)
Tb10.61.196040S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family. (266 aa)
Tb10.61.2040Fibrillarin, putative. (228 aa)
Tb10.61.2440Uncharacterized protein. (1040 aa)
Tb10.389.0160Periodic tryptophan protein 2, putative. (939 aa)
Tb10.389.0280Uncharacterized protein. (1236 aa)
Tb10.389.091060S ribosomal protein L34, putative. (170 aa)
Tb10.389.179060S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (215 aa)
Tb10.26.037040S ribosomal protein S3, putative. (214 aa)
Tb10.406.0540ATP-dependent DEAD/H RNA helicase, putative; Belongs to the DEAD box helicase family. (520 aa)
Tb10.6k15.0360Uncharacterized protein. (410 aa)
Tb10.6k15.3160Fibrillarin. (300 aa)
Tb10.6k15.3210Exosome complex exonuclease RRP41A. (252 aa)
Tb10.6k15.3220ATP-dependent DEAD/H RNA helicase, putative. (950 aa)
Tb10.6k15.334040S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
Tb10.70.0230PARP-type domain-containing protein. (240 aa)
Tb10.100.011060S ribosomal protein L37a, putative. (93 aa)
Tb10.70.0540ATP-dependent DEAD/H RNA helicase, putative; Belongs to the DEAD box helicase family. (512 aa)
Tb10.70.06105'-3' exoribonuclease XRND, putative. (801 aa)
Tb10.70.173040S ribosomal protein S18, putative; Belongs to the universal ribosomal protein uS13 family. (153 aa)
Tb10.70.336040S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
Tb10.70.337040S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
Tb10.70.3570DRIM domain-containing protein. (3901 aa)
Tb10.70.4960WD_REPEATS_REGION domain-containing protein. (696 aa)
Tb10.70.702040S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family. (143 aa)
Tb10.70.769540S ribosomal proteins S11, putative; Belongs to the universal ribosomal protein uS17 family. (174 aa)
Tb10.100.008040S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
Tb09.244.263040S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
Tb09.244.2650Uncharacterized protein. (897 aa)
Tb09.244.2790rRNA processing protein, putative. (251 aa)
Tb09.211.4870RNA 3'-terminal phosphate cyclase-like protein. (362 aa)
Tb09.211.3800SpoU_methylase domain-containing protein. (586 aa)
Tb09.211.3670CCHC-type domain-containing protein. (390 aa)
Tb09.211.2550WD_REPEATS_REGION domain-containing protein. (444 aa)
Tb09.211.011060S ribosomal protein L10, putative. (213 aa)
Tb09.211.0180Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (658 aa)
Tb09.160.5160Exosome complex exonuclease RRP40. (304 aa)
Tb09.160.445040S ribosomal protein S3, putative. (266 aa)
Tb09.160.3820Nucleolar RNA binding protein, putative. (501 aa)
Tb09.160.3670Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
Tb09.160.255040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
Tb09.160.249040S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (202 aa)
Tb09.160.1560Uncharacterized protein. (2631 aa)
TB927.1.318040S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS17 family. (174 aa)
TbEAP1RNasePH-like protein exosome-associated protein 1 Rrp42 homologue. (397 aa)
TB927.1.1370rRNA biogenesis protein, putative. (679 aa)
TB927.1.560Uncharacterized protein. (442 aa)
Tb927.8.6560SpoU_methylase domain-containing protein. (373 aa)
Tb927.7.23040S ribosomal protein S33, putative. (103 aa)
Tb927.5.3850XRN_N domain-containing protein. (891 aa)
Tb927.8.5040Uncharacterized protein. (278 aa)
Tb927.7.4220Uncharacterized protein. (1110 aa)
Tb927.7.4340Uncharacterized protein. (855 aa)
Tb927.5.1200Exosome component CSL4. (309 aa)
Tb927.8.1260CLP1_P domain-containing protein. (1034 aa)
Tb10.70.138040S ribosomal protein S9, putative; Belongs to the universal ribosomal protein uS4 family. (190 aa)
Tb927.7.104040S ribosomal protein S16, putative. (149 aa)
Tb927.8.28105'-3' exonuclease XRNC, putative. (868 aa)
Tb927.3.3590U3 small nucleolar ribonucleoprotein protein MPP10, putative. (672 aa)
Tb927.3.3950Uncharacterized protein. (550 aa)
Tb927.8.5490Uncharacterized protein. (623 aa)
Tb927.7.4670Ribosomal RNA processing protein 4. (324 aa)
Tb927.8.2600WD_REPEATS_REGION domain-containing protein. (646 aa)
Tb927.8.2500Ribosomal RNA methyltransferase, putative. (255 aa)
Tb927.7.234040S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family. (152 aa)
Tb927.4.4170rRNA methyltransferase, putative. (284 aa)
Tb927.8.5820Uncharacterized protein. (378 aa)
Tb927.8.615040S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (220 aa)
Tb927.7.5120SpoU_methylase domain-containing protein. (391 aa)
Tb927.5.2800Uncharacterized protein. (1084 aa)
Tb927.8.1410Uncharacterized protein. (777 aa)
Tb11.02.400040S ribosomal protein S15a, putative; Belongs to the universal ribosomal protein uS8 family. (130 aa)
Tb927.3.5400RIO domain-containing protein. (572 aa)
Tb927.3.5150Exonuclease, putative. (291 aa)
Tb927.3.5140Exonuclease domain-containing protein. (762 aa)
Tb927.3.5130Exonuclease domain-containing protein. (452 aa)
Tb927.8.3750Nucleolar protein, putative. (483 aa)
Tb927.4.1630Ribosomal RNA processing protein 6. (736 aa)
Tb927.8.1980WD_REPEATS_REGION domain-containing protein. (477 aa)
Tb927.5.2530RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1039 aa)
Tb927.4.3850WD_REPEATS_REGION domain-containing protein. (453 aa)
Tb927.4.2040Alba domain-containing protein. (190 aa)
Tb927.4.2030Alba domain-containing protein. (217 aa)
Tb927.4.1900WBS_methylT domain-containing protein. (379 aa)
Tb927.4.1860Ribosomal protein S19, putative. (167 aa)
Tb927.6.2840RIO domain-containing protein. (478 aa)
Tb927.6.2780U3 small nuclear ribonucleoprotein (SnRNP), putative. (287 aa)
Tb927.6.670Ribosomal RNA processing protein 45. (363 aa)
Tb927.4.3670CBF domain-containing protein. (457 aa)
Tb927.6.1900Bystin, putative. (475 aa)
Tb10.61.139040S ribosomal protein S13, putative; Belongs to the universal ribosomal protein uS15 family. (151 aa)
Tb927.2.4550Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (905 aa)
Tb927.2.4980Uncharacterized protein. (279 aa)
Tb927.6.4350KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (325 aa)
Tb927.6.4600Pre-mRNA splicing factor ATP-dependent RNA helicase, putative. (1009 aa)
Tb927.2.2950Uncharacterized protein. (980 aa)
Your Current Organism:
Trypanosoma brucei
NCBI taxonomy Id: 185431
Other names: T. brucei brucei TREU927, Trypanosoma brucei TREU927, Trypanosoma brucei brucei TREU927, Trypanosoma brucei brucei strain 927/4 GUTat10.1, Trypanosoma brucei strain TREU927
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