STRINGSTRING
OBY28578.1 OBY28578.1 leuD leuD leuC leuC OBY28605.1 OBY28605.1 OBY28615.1 OBY28615.1 OBY28634.1 OBY28634.1 OBY28699.1 OBY28699.1 OBY28700.1 OBY28700.1 OBY28701.1 OBY28701.1 OBY28703.1 OBY28703.1 OBY28704.1 OBY28704.1 OBY28705.1 OBY28705.1 OBY28719.1 OBY28719.1 OBY28726.1 OBY28726.1 OBY28732.1 OBY28732.1 OBY28736.1 OBY28736.1 OBY28767.1 OBY28767.1 OBY28771.1 OBY28771.1 uvrC uvrC OBY28777.1 OBY28777.1 OBY28843.1 OBY28843.1 OBY28844.1 OBY28844.1 sucD sucD OBY28853.1 OBY28853.1 OBY28859.1 OBY28859.1 OBY28873.1 OBY28873.1 OBY28888.1 OBY28888.1 OBY28891.1 OBY28891.1 OBY28892.1 OBY28892.1 OBY28893.1 OBY28893.1 OBY28900.1 OBY28900.1 OBY28910.1 OBY28910.1 OBY28926.1 OBY28926.1 OBY27156.1 OBY27156.1 OBY27158.1 OBY27158.1 uvrA uvrA OBY27183.1 OBY27183.1 OBY27216.1 OBY27216.1 lexA lexA moaC moaC OBY27226.1 OBY27226.1 OBY27232.1 OBY27232.1 pdxH pdxH OBY27236.1 OBY27236.1 OBY27240.1 OBY27240.1 rpsB rpsB OBY27443.1 OBY27443.1 OBY27329.1 OBY27329.1 OBY27330.1 OBY27330.1 OBY27334.1 OBY27334.1 OBY27339.1 OBY27339.1 psuG psuG OBY27370.1 OBY27370.1 OBY26352.1 OBY26352.1 OBY26370.1 OBY26370.1 OBY26371.1 OBY26371.1 OBY26377.1 OBY26377.1 OBY26381.1 OBY26381.1 OBY26410.1 OBY26410.1 OBY26420.1 OBY26420.1 OBY26430.1 OBY26430.1 ribH ribH xseB xseB OBY26456.1 OBY26456.1 OBY26474.1 OBY26474.1 OBY26510.1 OBY26510.1 OBY26517.1 OBY26517.1 ilvA ilvA mutL mutL ubiE ubiE OBY25802.1 OBY25802.1 OBY25932.1 OBY25932.1 potA potA potA-2 potA-2 fliI fliI gpsA gpsA hslV hslV hslU hslU OBY25302.1 OBY25302.1 OBY25316.1 OBY25316.1 OBY25317.1 OBY25317.1 OBY25359.1 OBY25359.1 OBY25376.1 OBY25376.1 OBY25392.1 OBY25392.1 accD accD A9D60_06745 A9D60_06745 OBY24973.1 OBY24973.1 OBY25005.1 OBY25005.1 OBY25045.1 OBY25045.1 OBY25064.1 OBY25064.1 OBY25066.1 OBY25066.1 tatC tatC tatB tatB tatA tatA OBY25092.1 OBY25092.1 OBY24656.1 OBY24656.1 OBY24663.1 OBY24663.1 OBY24689.1 OBY24689.1 accA accA OBY24714.1 OBY24714.1 OBY24802.1 OBY24802.1 OBY24740.1 OBY24740.1 dnaX dnaX OBY24776.1 OBY24776.1 OBY24785.1 OBY24785.1 OBY24418.1 OBY24418.1 OBY24548.1 OBY24548.1 dnaG dnaG OBY24454.1 OBY24454.1 ribH-2 ribH-2 OBY24513.1 OBY24513.1 OBY24518.1 OBY24518.1 cobQ cobQ OBY24278.1 OBY24278.1 OBY28434.1 OBY28434.1 OBY28453.1 OBY28453.1 OBY28457.1 OBY28457.1 OBY28458.1 OBY28458.1 OBY28459.1 OBY28459.1 OBY28464.1 OBY28464.1 trmB trmB OBY28480.1 OBY28480.1 OBY28493.1 OBY28493.1 OBY28500.1 OBY28500.1 OBY28503.1 OBY28503.1 OBY28524.1 OBY28524.1 glsA glsA OBY28333.1 OBY28333.1 OBY28334.1 OBY28334.1 OBY28343.1 OBY28343.1 OBY28348.1 OBY28348.1 OBY28353.1 OBY28353.1 potA-3 potA-3 OBY28367.1 OBY28367.1 OBY28156.1 OBY28156.1 OBY28205.1 OBY28205.1 clpX clpX OBY28266.1 OBY28266.1 OBY28042.1 OBY28042.1 OBY28068.1 OBY28068.1 OBY28071.1 OBY28071.1 OBY28091.1 OBY28091.1 OBY28136.1 OBY28136.1 OBY27933.1 OBY27933.1 OBY27936.1 OBY27936.1 OBY27937.1 OBY27937.1 OBY27989.1 OBY27989.1 OBY28006.1 OBY28006.1 rpsG rpsG rpsL rpsL rpoC rpoC rpoB rpoB rplJ rplJ rplA rplA OBY27767.1 OBY27767.1 OBY27780.1 OBY27780.1 rpoZ rpoZ atpF atpF atpF-2 atpF-2 atpE atpE atpB atpB ffh ffh OBY27857.1 OBY27857.1 OBY27874.1 OBY27874.1 recG recG dxr dxr OBY27688.1 OBY27688.1 fumC fumC OBY27616.1 OBY27616.1 OBY27646.1 OBY27646.1 potA-4 potA-4 OBY27538.1 OBY27538.1 OBY27539.1 OBY27539.1 OBY27562.1 OBY27562.1 kynA kynA OBY27471.1 OBY27471.1 moaA moaA OBY27491.1 OBY27491.1 OBY27501.1 OBY27501.1 OBY27070.1 OBY27070.1 sbcD sbcD OBY27074.1 OBY27074.1 OBY27148.1 OBY27148.1 OBY27080.1 OBY27080.1 OBY27096.1 OBY27096.1 OBY27106.1 OBY27106.1 OBY27016.1 OBY27016.1 eno eno A9D60_16555 A9D60_16555 OBY26951.1 OBY26951.1 OBY26956.1 OBY26956.1 OBY26967.1 OBY26967.1 gcvH gcvH gcvP gcvP OBY26892.1 OBY26892.1 OBY26897.1 OBY26897.1 OBY26906.1 OBY26906.1 OBY26907.1 OBY26907.1 gcvH-2 gcvH-2 priA priA ruvA ruvA ruvB ruvB OBY26818.1 OBY26818.1 uvrB uvrB OBY26724.1 OBY26724.1 OBY26664.1 OBY26664.1 OBY26666.1 OBY26666.1 potA-5 potA-5 OBY26613.1 OBY26613.1 xseA xseA OBY26646.1 OBY26646.1 OBY26599.1 OBY26599.1 OBY26583.1 OBY26583.1 A9D60_18705 A9D60_18705 OBY26585.1 OBY26585.1 OBY26587.1 OBY26587.1 OBY26290.1 OBY26290.1 OBY26291.1 OBY26291.1 OBY26296.1 OBY26296.1 rpoA rpoA rplO rplO rpmD rpmD rpsE rpsE rplN rplN rplV rplV rpsS rpsS rplB rplB OBY26270.1 OBY26270.1 OBY26275.1 OBY26275.1 OBY26201.1 OBY26201.1 OBY26211.1 OBY26211.1 OBY26142.1 OBY26142.1 OBY26159.1 OBY26159.1 OBY26089.1 OBY26089.1 OBY26109.1 OBY26109.1 carA carA OBY26065.1 OBY26065.1 OBY26048.1 OBY26048.1 OBY26023.1 OBY26023.1 OBY26046.1 OBY26046.1 OBY25991.1 OBY25991.1 OBY25995.1 OBY25995.1 OBY25996.1 OBY25996.1 OBY25998.1 OBY25998.1 OBY26007.1 OBY26007.1 sucD-2 sucD-2 OBY25967.1 OBY25967.1 OBY25707.1 OBY25707.1 potA-6 potA-6 ugpE ugpE OBY25618.1 OBY25618.1 A9D60_21565 A9D60_21565 ureB ureB rpsD rpsD atpH atpH atpA atpA atpG atpG atpD atpD atpC atpC OBY25536.1 OBY25536.1 OBY25543.1 OBY25543.1 OBY25507.1 OBY25507.1 OBY25513.1 OBY25513.1 OBY25514.1 OBY25514.1 OBY25521.1 OBY25521.1 OBY25525.1 OBY25525.1 gatA gatA OBY25230.1 OBY25230.1 OBY25220.1 OBY25220.1 A9D60_22745 A9D60_22745 A9D60_22770 A9D60_22770 OBY25163.1 OBY25163.1 OBY25178.1 OBY25178.1 OBY25150.1 OBY25150.1 OBY25158.1 OBY25158.1 OBY25132.1 OBY25132.1 A9D60_23220 A9D60_23220 OBY24896.1 OBY24896.1 OBY24886.1 OBY24886.1 OBY24870.1 OBY24870.1 OBY24873.1 OBY24873.1 OBY24841.1 OBY24841.1 A9D60_23635 A9D60_23635 OBY24831.1 OBY24831.1 OBY24814.1 OBY24814.1 rpmF rpmF OBY24557.1 OBY24557.1 OBY24380.1 OBY24380.1 OBY28414.1 OBY28414.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OBY28578.1Nickel/dipeptide/oligopeptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
leuD3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (201 aa)
leuC3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (467 aa)
OBY28605.1Phosphatidylethanolamine N-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)
OBY28615.1Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
OBY28634.1Protease/lipase ABC transporter permease/ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (577 aa)
OBY28699.1Phosphonate C-P lyase system protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
OBY28700.1Phosphonate C-P lyase system protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
OBY28701.1Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
OBY28703.1Carbon-phosphorus lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family. (285 aa)
OBY28704.1Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
OBY28705.1Phosphonate C-P lyase system protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
OBY28719.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (637 aa)
OBY28726.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
OBY28732.1Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OBY28736.1enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
OBY28767.14-hydroxybenzoate 3-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)
OBY28771.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
uvrCExcinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (626 aa)
OBY28777.1Molybdopterin converting factor subunit 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
OBY28843.1Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (502 aa)
OBY28844.12-oxoglutarate dehydrogenase E1 component; Derived by automated computational analysis using gene prediction method: Protein Homology. (983 aa)
sucDsuccinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
OBY28853.1malyl-CoA thiolesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (284 aa)
OBY28859.1Succinate dehydrogenase, cytochrome b556 subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
OBY28873.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
OBY28888.1Phenylacetic acid catabolic; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
OBY28891.1phenylacetate-CoA oxygenase subunit PaaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
OBY28892.11,2-phenylacetyl-CoA epoxidase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
OBY28893.11,2-phenylacetyl-CoA epoxidase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
OBY28900.1Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
OBY28910.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
OBY28926.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
OBY27156.1Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (444 aa)
OBY27158.1Pyruvate dehydrogenase complex E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (456 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (952 aa)
OBY27183.13-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family. (291 aa)
OBY27216.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
lexARepressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (235 aa)
moaCMolybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (156 aa)
OBY27226.1Anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
OBY27232.1Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
pdxHPyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). (201 aa)
OBY27236.1Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (1214 aa)
OBY27240.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
rpsB30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family. (257 aa)
OBY27443.13-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
OBY27329.1Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
OBY27330.1Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
OBY27334.1Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
OBY27339.1Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
psuGPseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family. (304 aa)
OBY27370.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (607 aa)
OBY26352.1DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (373 aa)
OBY26370.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family. (443 aa)
OBY26371.12-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)
OBY26377.1Porin; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
OBY26381.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (342 aa)
OBY26410.1LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
OBY26420.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
OBY26430.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (444 aa)
ribHRiboflavin synthase subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (145 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (80 aa)
OBY26456.1acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (675 aa)
OBY26474.1Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1510 aa)
OBY26510.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
OBY26517.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (408 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (648 aa)
ubiEBifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2). (248 aa)
OBY25802.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
OBY25932.1Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
potASpermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (366 aa)
potA-2ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (375 aa)
fliIFlagellum-specific ATP synthase FliI; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)
gpsAGlycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (320 aa)
hslVHslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (187 aa)
hslUHslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. (437 aa)
OBY25302.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
OBY25316.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
OBY25317.1acetyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (717 aa)
OBY25359.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (492 aa)
OBY25376.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (685 aa)
OBY25392.1Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
accDacetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (317 aa)
A9D60_06745tRNA-Pro; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (359 aa)
OBY24973.1ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (360 aa)
OBY25005.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
OBY25045.1Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (554 aa)
OBY25064.1Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. (512 aa)
OBY25066.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
tatCTwin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. (298 aa)
tatBTwin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. (158 aa)
tatAProhead protease; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. (71 aa)
OBY25092.1Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (368 aa)
OBY24656.1Transketolase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (794 aa)
OBY24663.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (125 aa)
OBY24689.1ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (361 aa)
accAacetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (320 aa)
OBY24714.1malyl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (319 aa)
OBY24802.1Transcriptional regulator, HxlR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
OBY24740.1Ubiquinone biosynthesis protein UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (598 aa)
OBY24776.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (637 aa)
OBY24785.1Cytochrome c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (536 aa)
OBY24418.1Cytochrome c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family. (540 aa)
OBY24548.13-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (663 aa)
OBY24454.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (377 aa)
ribH-26,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (183 aa)
OBY24513.1precorrin-3B synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
OBY24518.1Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (525 aa)
cobQCobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (485 aa)
OBY24278.1Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
OBY28434.1Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (398 aa)
OBY28453.12-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
OBY28457.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
OBY28458.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
OBY28459.1Manganese/iron transporter ATP-binding protein; With SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
OBY28464.1Diaminopropionate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
trmBtRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (258 aa)
OBY28480.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
OBY28493.1Sulfopyruvate decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
OBY28500.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
OBY28503.1Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
OBY28524.13D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (618 aa)
glsAGlutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. (306 aa)
OBY28333.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
OBY28334.1Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
OBY28343.1Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology. (65 aa)
OBY28348.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
OBY28353.1Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (368 aa)
potA-3Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (367 aa)
OBY28367.1Ring-hydroxylating oxygenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
OBY28156.1Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
OBY28205.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (112 aa)
clpXATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (422 aa)
OBY28266.1acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (164 aa)
OBY28042.1Transcriptional regulator/antitoxin MazE; Derived by automated computational analysis using gene prediction method: Protein Homology. (74 aa)
OBY28068.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
OBY28071.1Glycine betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
OBY28091.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
OBY28136.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (520 aa)
OBY27933.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
OBY27936.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
OBY27937.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
OBY27989.1SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
OBY28006.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
rpsG30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. (156 aa)
rpsL30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. (123 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1413 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1378 aa)
rplJ50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (172 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa)
OBY27767.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
OBY27780.1RNase adaptor protein RapZ; Displays ATPase and GTPase activities. (292 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (117 aa)
atpFATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (185 aa)
atpF-2ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (175 aa)
atpEF0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (78 aa)
atpBF0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (266 aa)
ffhSignal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...] (507 aa)
OBY27857.1Homogentisate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
OBY27874.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (550 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (696 aa)
dxr1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (390 aa)
OBY27688.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
fumCFumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
OBY27616.1Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (707 aa)
OBY27646.1Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
potA-4Fe3+/spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (361 aa)
OBY27538.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
OBY27539.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
OBY27562.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
kynATryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety. (277 aa)
OBY27471.1Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
moaACyclic pyranopterin phosphate synthase MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (336 aa)
OBY27491.1methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)
OBY27501.1NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (432 aa)
OBY27070.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1026 aa)
sbcDExonuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (378 aa)
OBY27074.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
OBY27148.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (700 aa)
OBY27080.1Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (435 aa)
OBY27096.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (914 aa)
OBY27106.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
OBY27016.1DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
enoPhosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (424 aa)
A9D60_16555Multidrug ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (374 aa)
OBY26951.1C4-dicarboxylate ABC transporter; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (350 aa)
OBY26956.1Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology. (417 aa)
OBY26967.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (121 aa)
gcvPGlycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (950 aa)
OBY26892.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. (370 aa)
OBY26897.1Taurine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
OBY26906.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
OBY26907.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
gcvH-2Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (119 aa)
priAPrimosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (731 aa)
ruvAHolliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (229 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (339 aa)
OBY26818.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1001 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (732 aa)
OBY26724.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (129 aa)
OBY26664.1Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
OBY26666.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
potA-5ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (369 aa)
OBY26613.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (268 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (498 aa)
OBY26646.1Ubiquinone biosynthesis protein UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
OBY26599.1Ethanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family. (260 aa)
OBY26583.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (128 aa)
A9D60_18705Integrase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
OBY26585.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (505 aa)
OBY26587.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (263 aa)
OBY26290.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
OBY26291.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (410 aa)
OBY26296.1AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (338 aa)
rplO50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family. (156 aa)
rpmD50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology. (62 aa)
rpsE30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. (189 aa)
rplN50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. (122 aa)
rplV50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. (126 aa)
rpsS30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. (92 aa)
rplB50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. (280 aa)
OBY26270.1Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (761 aa)
OBY26275.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1667 aa)
OBY26201.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)
OBY26211.1General secretion pathway protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (463 aa)
OBY26142.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
OBY26159.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
OBY26089.1Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology. (529 aa)
OBY26109.1(R)-hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
carACarbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (386 aa)
OBY26065.12-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
OBY26048.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (99 aa)
OBY26023.1Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
OBY26046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
OBY25991.1C4-dicarboxylate ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (353 aa)
OBY25995.1Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
OBY25996.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
OBY25998.1HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
OBY26007.1malyl-CoA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family. (325 aa)
sucD-2succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (297 aa)
OBY25967.1methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (510 aa)
OBY25707.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
potA-6Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (376 aa)
ugpEGlycerol-3-phosphate transporter; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (283 aa)
OBY25618.1Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
A9D60_21565Transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
ureBUrease subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease beta subunit family. (101 aa)
rpsD30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. (206 aa)
atpHATP synthase F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (186 aa)
atpAF0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (512 aa)
atpGF0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (291 aa)
atpDF0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (474 aa)
atpCATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane. (137 aa)
OBY25536.1Sulfur oxidation c-type cytochrome SoxA; Derived by automated computational analysis using gene prediction method: Protein Homology. (281 aa)
OBY25543.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
OBY25507.1Histidine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
OBY25513.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
OBY25514.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
OBY25521.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)
OBY25525.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (98 aa)
gatAaspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). (495 aa)
OBY25230.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (435 aa)
OBY25220.1Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
A9D60_22745Succinylglutamate desuccinylase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (256 aa)
A9D60_22770Integrase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
OBY25163.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
OBY25178.1P-type DNA transfer ATPase VirB11; Part of the Type IV secretion system. Belongs to the GSP E family. (338 aa)
OBY25150.1LLM class oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)
OBY25158.1Methyltransferase; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (150 aa)
OBY25132.1Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
A9D60_23220Transposase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
OBY24896.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (515 aa)
OBY24886.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
OBY24870.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (498 aa)
OBY24873.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (226 aa)
OBY24841.1Chemotaxis protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. (285 aa)
A9D60_23635TraG; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology. (994 aa)
OBY24831.1AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (88 aa)
OBY24814.1Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (924 aa)
rpmF50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family. (68 aa)
OBY24557.1Phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily. (229 aa)
OBY24380.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (421 aa)
OBY28414.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (708 aa)
Your Current Organism:
Leisingera sp. JC1
NCBI taxonomy Id: 1855282
Other names: L. sp. JC1
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