(23 nodes) PAC motif network (Bradyrhizobium sp. Ghvi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SFP55474.1	PAS domain-containing protein. (331 aa)
	SFN95957.1	PAS domain S-box-containing protein. (656 aa)
	SFN60908.1	PAS domain S-box-containing protein. (891 aa)
	SFP59872.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (898 aa)
	SFN66736.1	PAS domain S-box-containing protein. (513 aa)
	SFN80634.1	PAS domain S-box-containing protein. (346 aa)
	SFN81328.1	PAS domain S-box-containing protein. (142 aa)
	SFN87571.1	Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. (558 aa)
	SFO20889.1	PAS domain S-box-containing protein. (660 aa)
	SFO46510.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (958 aa)
	SFO59862.1	PAS domain S-box-containing protein. (1203 aa)
	SFO68216.1	PAS domain S-box-containing protein. (926 aa)
	SFO73987.1	PAS domain S-box-containing protein. (895 aa)
	SFO75538.1	PAS domain S-box-containing protein. (824 aa)
	SFO67168.1	PAS domain S-box-containing protein. (644 aa)
	SFQ11628.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (882 aa)
	SFP00150.1	PAS/PAC sensor signal transduction histidine kinase. (505 aa)
	SFP11010.1	Two-component system, cell cycle sensor histidine kinase PleC. (776 aa)
	SFP28704.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (634 aa)
	SFP39950.1	PAS domain S-box-containing protein. (494 aa)
	SFP47106.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (634 aa)
	SFP52205.1	PAS domain S-box-containing protein. (1067 aa)
	SFP55380.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (705 aa)

Your Current Organism:

Bradyrhizobium sp. Ghvi

NCBI taxonomy Id: 1855319
Other names: B. sp. Ghvi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFN60908.1	SFN66736.1	SAMN05216330_10111	SAMN05216330_101182	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.923
SFN60908.1	SFN80634.1	SAMN05216330_10111	SAMN05216330_101619	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.748
SFN60908.1	SFN87571.1	SAMN05216330_10111	SAMN05216330_101806	PAS domain S-box-containing protein.	Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.	0.509
SFN60908.1	SFN95957.1	SAMN05216330_10111	SAMN05216330_1011067	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.990
SFN60908.1	SFO20889.1	SAMN05216330_10111	SAMN05216330_102221	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.701
SFN60908.1	SFO46510.1	SAMN05216330_10111	SAMN05216330_103130	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.605
SFN60908.1	SFO59862.1	SAMN05216330_10111	SAMN05216330_103815	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.672
SFN60908.1	SFO67168.1	SAMN05216330_10111	SAMN05216330_10492	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.776
SFN60908.1	SFO68216.1	SAMN05216330_10111	SAMN05216330_104151	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.972
SFN60908.1	SFO73987.1	SAMN05216330_10111	SAMN05216330_104436	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.936
SFN60908.1	SFO75538.1	SAMN05216330_10111	SAMN05216330_104517	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.963
SFN60908.1	SFP00150.1	SAMN05216330_10111	SAMN05216330_105274	PAS domain S-box-containing protein.	PAS/PAC sensor signal transduction histidine kinase.	0.753
SFN60908.1	SFP11010.1	SAMN05216330_10111	SAMN05216330_105617	PAS domain S-box-containing protein.	Two-component system, cell cycle sensor histidine kinase PleC.	0.770
SFN60908.1	SFP28704.1	SAMN05216330_10111	SAMN05216330_106275	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.727
SFN60908.1	SFP39950.1	SAMN05216330_10111	SAMN05216330_107108	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.783
SFN60908.1	SFP47106.1	SAMN05216330_10111	SAMN05216330_107327	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.754
SFN60908.1	SFP52205.1	SAMN05216330_10111	SAMN05216330_1087	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.990
SFN60908.1	SFP59872.1	SAMN05216330_10111	SAMN05216330_108250	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.548
SFN60908.1	SFQ11628.1	SAMN05216330_10111	SAMN05216330_11611	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.605
SFN66736.1	SFN60908.1	SAMN05216330_101182	SAMN05216330_10111	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.923