(47 nodes) PAS domain network (Streptomyces sp. Ag109O510)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SEE96016.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (554 aa)
	SED65432.1	PAS domain S-box-containing protein. (682 aa)
	SED65524.1	PAS domain S-box-containing protein. (811 aa)
	SED74541.1	PAS domain S-box-containing protein. (796 aa)
	SED79917.1	PAS domain-containing protein. (813 aa)
	SED80657.1	PAS domain S-box-containing protein. (473 aa)
	SED82211.1	PAS fold-containing protein. (725 aa)
	SED85721.1	PAS domain S-box-containing protein. (692 aa)
	SEE17317.1	Serine phosphatase RsbU, regulator of sigma subunit. (815 aa)
	SEE21075.1	PAS domain S-box-containing protein. (829 aa)
	SEE23571.1	PAS domain S-box-containing protein. (591 aa)
	SEE31373.1	PAS domain S-box-containing protein. (814 aa)
	SEE39979.1	PAS domain S-box-containing protein. (1392 aa)
	SEE46067.1	PAS domain S-box-containing protein. (917 aa)
	SEE52303.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (1004 aa)
	SEE54884.1	Sensor histidine kinase regulating citrate/malate metabolism. (541 aa)
	SEE59669.1	Histidine kinase. (488 aa)
	SEE63706.1	PAS domain S-box-containing protein. (862 aa)
	SEE66628.1	PAS domain S-box-containing protein. (815 aa)
	SEE86118.1	PAS domain S-box-containing protein. (828 aa)
	SEE86178.1	PAS domain-containing protein. (913 aa)
	SEE88037.1	Serine phosphatase RsbU, regulator of sigma subunit. (705 aa)
	SEE88076.1	PAS domain S-box-containing protein. (799 aa)
	SEE92404.1	PAS domain S-box-containing protein. (1362 aa)
	SEE94119.1	Histidine kinase-like ATPase domain-containing protein. (548 aa)
	SEE97086.1	PAS domain S-box-containing protein. (476 aa)
	SEF03955.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (621 aa)
	SEF08541.1	PAS domain S-box-containing protein. (369 aa)
	SEF13836.1	PAS fold-containing protein. (378 aa)
	SEF14420.1	Sensor histidine kinase regulating citrate/malate metabolism. (573 aa)
	SEF15280.1	Two-component system, CitB family, sensor kinase. (564 aa)
	SEF15414.1	Serine phosphatase RsbU, regulator of sigma subunit. (416 aa)
	SEF15548.1	Serine phosphatase RsbU, regulator of sigma subunit. (855 aa)
	SEF15686.1	PAS domain S-box-containing protein. (702 aa)
	SEF15749.1	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (714 aa)
	SEF15863.1	PAS domain S-box-containing protein. (617 aa)
	SEF16358.1	PAS domain S-box-containing protein. (795 aa)
	SEF16403.1	Serine phosphatase RsbU, regulator of sigma subunit. (722 aa)
	SEF16420.1	PAS fold-containing protein. (780 aa)
	SEF16535.1	Serine phosphatase RsbU, regulator of sigma subunit. (804 aa)
	SEF16611.1	PAS domain S-box-containing protein. (830 aa)
	SEF16742.1	PAS domain S-box-containing protein. (790 aa)
	SEF16845.1	PAS domain S-box-containing protein. (854 aa)
	SEF17099.1	PAS domain S-box-containing protein. (697 aa)
	SEF17101.1	PAS domain S-box-containing protein. (822 aa)
	SEF17175.1	Serine phosphatase RsbU, regulator of sigma subunit. (713 aa)
	SEF17335.1	PAS domain S-box-containing protein. (817 aa)

Your Current Organism:

Streptomyces sp. Ag109O510

NCBI taxonomy Id: 1855349
Other names: S. sp. Ag109_O5-10, Streptomyces sp. Ag109_O5-10

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SED65432.1	SED65524.1	SAMN05216533_0195	SAMN05216533_0197	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.628
SED65432.1	SED74541.1	SAMN05216533_0195	SAMN05216533_0441	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.640
SED65432.1	SED79917.1	SAMN05216533_0195	SAMN05216533_0584	PAS domain S-box-containing protein.	PAS domain-containing protein.	0.629
SED65432.1	SED82211.1	SAMN05216533_0195	SAMN05216533_0646	PAS domain S-box-containing protein.	PAS fold-containing protein.	0.667
SED65432.1	SEE17317.1	SAMN05216533_0195	SAMN05216533_1577	PAS domain S-box-containing protein.	Serine phosphatase RsbU, regulator of sigma subunit.	0.531
SED65432.1	SEE21075.1	SAMN05216533_0195	SAMN05216533_1679	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.623
SED65432.1	SEE31373.1	SAMN05216533_0195	SAMN05216533_1944	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.640
SED65432.1	SEE39979.1	SAMN05216533_0195	SAMN05216533_2190	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.982
SED65432.1	SEE46067.1	SAMN05216533_0195	SAMN05216533_2378	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.841
SED65432.1	SEE52303.1	SAMN05216533_0195	SAMN05216533_2588	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.934
SED65432.1	SEE63706.1	SAMN05216533_0195	SAMN05216533_3030	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.737
SED65432.1	SEE66628.1	SAMN05216533_0195	SAMN05216533_3162	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.618
SED65432.1	SEE86118.1	SAMN05216533_0195	SAMN05216533_4026	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.635
SED65432.1	SEE88037.1	SAMN05216533_0195	SAMN05216533_4140	PAS domain S-box-containing protein.	Serine phosphatase RsbU, regulator of sigma subunit.	0.668
SED65432.1	SEE88076.1	SAMN05216533_0195	SAMN05216533_4142	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.632
SED65432.1	SEE92404.1	SAMN05216533_0195	SAMN05216533_4401	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.613
SED65432.1	SEE96016.1	SAMN05216533_0195	SAMN05216533_4687	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.582
SED65432.1	SEF03955.1	SAMN05216533_0195	SAMN05216533_5430	PAS domain S-box-containing protein.	PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.	0.662
SED65432.1	SEF08541.1	SAMN05216533_0195	SAMN05216533_6067	PAS domain S-box-containing protein.	PAS domain S-box-containing protein.	0.981
SED65432.1	SEF15414.1	SAMN05216533_0195	SAMN05216533_7389	PAS domain S-box-containing protein.	Serine phosphatase RsbU, regulator of sigma subunit.	0.422