STRINGSTRING
walR walR walK walK yycH yycH yycI yycI yycJ_1 yycJ_1 rlmH rlmH ARQ05704.1 ARQ05704.1 saeR saeR saeS saeS hrtA_1 hrtA_1 ARQ05863.1 ARQ05863.1 hssR hssR hssS hssS ARQ05891.1 ARQ05891.1 hrtA_2 hrtA_2 ARQ06087.1 ARQ06087.1 rpoE_1 rpoE_1 ARQ06089.1 ARQ06089.1 graR graR graS graS yxdL yxdL bceB bceB kinD kinD arlS arlS arlR_1 arlR_1 ydaF ydaF spo0A spo0A phoR phoR phoP phoP evgS evgS regX3 regX3 spo0F spo0F
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
walRTranscriptional regulatory protein WalR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (233 aa)
walKSensor protein kinase WalK; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (612 aa)
yycHTwo-component system YycF/YycG regulatory protein YycH; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (437 aa)
yycITwo-component system YycFG regulatory protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (263 aa)
yycJ_1Putative metallo-hydrolase YycJ; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (263 aa)
rlmHPutative SPOUT methyltransferase family protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family. (159 aa)
ARQ05704.1Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (180 aa)
saeRResponse regulator SaeR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (231 aa)
saeSHistidine protein kinase SaeS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (339 aa)
hrtA_1Putative hemin import ATP-binding protein HrtA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (223 aa)
ARQ05863.1FtsX-like permease family protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (340 aa)
hssRHeme response regulator HssR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (223 aa)
hssSHeme sensor protein HssS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (447 aa)
ARQ05891.1FtsX-like permease family protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (349 aa)
hrtA_2Putative hemin import ATP-binding protein HrtA; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (221 aa)
ARQ06087.1Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (136 aa)
rpoE_1ECF RNA polymerase sigma factor RpoE; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern; Belongs to the sigma-70 factor family. ECF subfamily. (176 aa)
ARQ06089.1Hypothetical protein; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (341 aa)
graRResponse regulator protein GraR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (227 aa)
graSSensor histidine kinase GraS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (293 aa)
yxdLABC transporter ATP-binding protein YxdL; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (249 aa)
bceBBacitracin export permease protein BceB; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (656 aa)
kinDSporulation kinase D; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (487 aa)
arlSSignal transduction histidine-protein kinase ArlS; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (456 aa)
arlR_1Response regulator ArlR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (223 aa)
ydaFPutative ribosomal N-acetyltransferase YdaF; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (198 aa)
spo0AStage 0 sporulation protein A; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (223 aa)
phoRAlkaline phosphatase synthesis sensor protein PhoR; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (570 aa)
phoPAlkaline phosphatase synthesis transcriptional regulatory protein PhoP; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (237 aa)
evgSSensor protein EvgS precursor; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (296 aa)
regX3Sensory transduction protein regX3; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (219 aa)
spo0FSporulation initiation phosphotransferase F; Bacteria and source DNA available from Institute of Veterinary Bacteriology, University Bern. (115 aa)
Your Current Organism:
Macrococcus canis
NCBI taxonomy Id: 1855823
Other names: CCM 8748, CCOS 969, CCOS:969, CCUG 68920, DSM 101690, M. canis, Macrococcus canis Gobeli Brawand et al. 2017, Macrococcus sp. KM45013, strain KM 45013
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