STRINGSTRING
lytM lytM ftsW_1 ftsW_1 LuPra_01866 LuPra_01866 amiC amiC envC envC spoIIQ_1 spoIIQ_1 parB_1 parB_1 soj_1 soj_1 LuPra_03509 LuPra_03509 miaB miaB rnjA rnjA spoIIIE spoIIIE amiA amiA pbpG_2 pbpG_2 murAA murAA murB murB mpl mpl mrcA_1 mrcA_1 mrcA_2 mrcA_2 ddl_1 ddl_1 mrdB mrdB spoVD spoVD LuPra_04775 LuPra_04775 mreC mreC mreB mreB alr alr pbpG_3 pbpG_3 LuPra_05107 LuPra_05107 LuPra_05529 LuPra_05529 mrcA_3 mrcA_3 ddl_2 ddl_2 LuPra_05869 LuPra_05869 divIVA divIVA LuPra_05871 LuPra_05871 yfiH yfiH ftsZ ftsZ ftsA ftsA LuPra_05905 LuPra_05905 murC murC murG murG ftsW_2 ftsW_2 murD murD mraY mraY murF murF murE murE ftsI ftsI LuPra_05914 LuPra_05914 rsmH_2 rsmH_2 mraZ mraZ kanE kanE arnC_6 arnC_6 csbB csbB arnC_7 arnC_7 LuPra_05921 LuPra_05921 fdtB_1 fdtB_1 LuPra_05923 LuPra_05923 LuPra_05924 LuPra_05924 LuPra_05925 LuPra_05925 spoIIQ_3 spoIIQ_3 parB_2 parB_2 soj_2 soj_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lytMGlycyl-glycine endopeptidase LytM. (434 aa)
ftsW_1Cell division protein FtsW; Belongs to the SEDS family. (1099 aa)
LuPra_01866Rhomboid family protein. (294 aa)
amiCN-acetylmuramoyl-L-alanine amidase AmiC. (535 aa)
envCSeptal ring factor. (394 aa)
spoIIQ_1Stage II sporulation protein Q. (301 aa)
parB_1Putative chromosome-partitioning protein ParB; Belongs to the ParB family. (292 aa)
soj_1Sporulation initiation inhibitor protein soj. (252 aa)
LuPra_03509BFN domain-containing protein. (160 aa)
miaBtRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. (452 aa)
rnjARibonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (558 aa)
spoIIIEStage III sporulation protein E. (807 aa)
amiAN-acetylmuramoyl-L-alanine amidase AmiA. (665 aa)
pbpG_2Penicillin-binding protein 2D. (671 aa)
murAAUDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. (418 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (326 aa)
mplUDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase. (466 aa)
mrcA_1Penicillin-binding protein 1A. (792 aa)
mrcA_2Penicillin-binding protein 1A. (752 aa)
ddl_1D-alanine--D-alanine ligase. (339 aa)
mrdBRod shape-determining protein RodA; Belongs to the SEDS family. (366 aa)
spoVDSporulation-specific penicillin-binding protein. (644 aa)
LuPra_04775Rod shape-determining protein MreD. (174 aa)
mreCCell shape-determining protein MreC; Involved in formation and maintenance of cell shape. (325 aa)
mreBRod shape-determining protein MreB. (341 aa)
alrAlanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (385 aa)
pbpG_3Penicillin-binding protein 2D. (803 aa)
LuPra_05107Glycyl-glycine endopeptidase ALE-1. (276 aa)
LuPra_05529Uncharacterized protein. (264 aa)
mrcA_3Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. (317 aa)
ddl_2D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. (380 aa)
LuPra_05869Pyridoxal phosphate homeostasis protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (235 aa)
divIVAMinicell-associated protein DivIVA. (314 aa)
LuPra_05871Uncharacterized protein. (115 aa)
yfiHPolyphenol oxidase; Belongs to the multicopper oxidase YfiH/RL5 family. (255 aa)
ftsZCell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. (422 aa)
ftsACell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family. (411 aa)
LuPra_05905Cell division protein FtsQ; Essential cell division protein. (311 aa)
murCUDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. (467 aa)
murGUndecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. (357 aa)
ftsW_2Cell division protein FtsW; Belongs to the SEDS family. (372 aa)
murDUDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. (464 aa)
mraYPhospho-N-acetylmuramoyl-pentapeptide-transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (361 aa)
murFUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. (463 aa)
murEUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. (513 aa)
ftsIPeptidoglycan synthase FtsI. (788 aa)
LuPra_05914Cell division protein FtsL. (127 aa)
rsmH_2Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (294 aa)
mraZTranscriptional regulator MraZ; Belongs to the MraZ family. (148 aa)
kanEGlycosyltransferase KanE. (345 aa)
arnC_6Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. (286 aa)
csbBGlycosyltransferase CsbB. (246 aa)
arnC_7Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase. (250 aa)
LuPra_05921UDP-glucose 4-epimerase. (331 aa)
fdtB_1dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (366 aa)
LuPra_05923Uncharacterized protein. (283 aa)
LuPra_05924Uncharacterized protein. (153 aa)
LuPra_05925FG-GAP repeat. (558 aa)
spoIIQ_3Stage II sporulation protein Q. (464 aa)
parB_2Putative chromosome-partitioning protein ParB; Belongs to the ParB family. (274 aa)
soj_2Sporulation initiation inhibitor protein soj. (300 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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