STRINGSTRING
mmgB mmgB pcaF pcaF fadB fadB echA8 echA8 fadE fadE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
mmgBPutative 3-hydroxybutyryl-CoA dehydrogenase. (282 aa)
pcaFBeta-ketoadipyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (407 aa)
fadBFatty acid oxidation complex subunit alpha. (715 aa)
echA8Putative enoyl-CoA hydratase echA8. (260 aa)
fadEPutative acyl-CoA dehydrogenase. (592 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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