Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| mdeA_2 | metE_2 | LuPra_03204 | LuPra_04022 | Methionine gamma-lyase. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | 0.949 |
| mdeA_2 | metH | LuPra_03204 | LuPra_03590 | Methionine gamma-lyase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.973 |
| mdeA_2 | metK | LuPra_03204 | LuPra_04595 | Methionine gamma-lyase. | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | 0.928 |
| mdeA_2 | xecA1 | LuPra_03204 | LuPra_00255 | Methionine gamma-lyase. | 2-hydroxypropyl-CoM lyase. | 0.949 |
| mdeA_2 | yitJ_1 | LuPra_03204 | LuPra_03023 | Methionine gamma-lyase. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.997 |
| metE_2 | mdeA_2 | LuPra_04022 | LuPra_03204 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | Methionine gamma-lyase. | 0.949 |
| metE_2 | metH | LuPra_04022 | LuPra_03590 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.967 |
| metE_2 | metK | LuPra_04022 | LuPra_04595 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | 0.971 |
| metE_2 | xecA1 | LuPra_04022 | LuPra_00255 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | 2-hydroxypropyl-CoM lyase. | 0.928 |
| metE_2 | yitJ_1 | LuPra_04022 | LuPra_03023 | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.997 |
| metH | mdeA_2 | LuPra_03590 | LuPra_03204 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Methionine gamma-lyase. | 0.973 |
| metH | metE_2 | LuPra_03590 | LuPra_04022 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | 0.967 |
| metH | metK | LuPra_03590 | LuPra_04595 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | 0.943 |
| metH | xecA1 | LuPra_03590 | LuPra_00255 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 2-hydroxypropyl-CoM lyase. | 0.967 |
| metH | yitJ_1 | LuPra_03590 | LuPra_03023 | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.999 |
| metK | mdeA_2 | LuPra_04595 | LuPra_03204 | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | Methionine gamma-lyase. | 0.928 |
| metK | metE_2 | LuPra_04595 | LuPra_04022 | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase. | 0.971 |
| metK | metH | LuPra_04595 | LuPra_03590 | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.943 |
| metK | xecA1 | LuPra_04595 | LuPra_00255 | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | 2-hydroxypropyl-CoM lyase. | 0.971 |
| metK | yitJ_1 | LuPra_04595 | LuPra_03023 | S-adenosylmethionine synthase; Belongs to the AdoMet synthase family. | Bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase. | 0.989 |
page 1 of 2