(74 nodes) Mixed, incl. Degradation of aromatic compounds, and Styrene degradation network (Luteitalea pratensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

Your Input:
	LuPra_00025	Putative metal-dependent hydrolase of the TIM-barrel fold protein. (300 aa)
	dgoD_1	D-galactonate dehydratase. (404 aa)
	gatA_2	Glutamyl-tRNA(Gln) amidotransferase subunit A. (541 aa)
	glxR	2-hydroxy-3-oxopropionate reductase. (309 aa)
	LuPra_01473	Arsenite S-adenosylmethyltransferase. (274 aa)
	LuPra_01474	Imidazolonepropionase. (432 aa)
	LuPra_01475	GDSL-like Lipase/Acylhydrolase. (482 aa)
	LuPra_01476	DUF2235 domain-containing protein. (800 aa)
	LuPra_01477	N(G),N(G)-dimethylarginine dimethylaminohydrolase. (260 aa)
	LuPra_01720	Uncharacterized protein. (218 aa)
	dmlR	D-malate degradation protein R; Belongs to the LysR transcriptional regulatory family. (295 aa)
	nepI	Purine ribonucleoside efflux pump NepI. (176 aa)
	LuPra_01723	Peptidase_S15 domain-containing protein. (373 aa)
	LuPra_01724	Cyclophil_like2 domain-containing protein. (155 aa)
	LuPra_01725	S-(Hydroxymethyl)mycothiol dehydrogenase. (338 aa)
	LuPra_01726	4-carboxymuconolactone decarboxylase. (129 aa)
	LuPra_01727	Cupin domain protein. (134 aa)
	LuPra_01749	Uncharacterized protein. (286 aa)
	LuPra_01841	Catechol 1,2-dioxygenase. (239 aa)
	LuPra_01843	Uncharacterized protein. (80 aa)
	LuPra_01879	Putative metal-dependent hydrolase of the TIM-barrel fold protein. (336 aa)
	LuPra_01982	Ureidoglycolate lyase. (270 aa)
	LuPra_01992	DUF4097 domain-containing protein. (304 aa)
	bcr	Sulfonamide resistance protein. (398 aa)
	hmgA	Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (445 aa)
	gatA_3	Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. (529 aa)
	LuPra_03061	Uncharacterized protein. (81 aa)
	adh	NADP-dependent isopropanol dehydrogenase. (366 aa)
	LuPra_03063	Beta-lactamase/D-alanine carboxypeptidase. (400 aa)
	LuPra_03162	Uncharacterized protein. (169 aa)
	bglA	Beta-glucanase. (256 aa)
	tdh_1	L-threonine 3-dehydrogenase. (343 aa)
	LuPra_03166	Collagenase. (339 aa)
	dgoD_4	D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (384 aa)
	phhA	Phenylalanine-4-hydroxylase. (300 aa)
	hpd	4-hydroxyphenylpyruvate dioxygenase. (382 aa)
	LuPra_03283	Uncharacterized protein. (311 aa)
	LuPra_03284	Fumarylacetoacetase. (447 aa)
	LuPra_03285	DUF218 domain-containing protein. (201 aa)
	LuPra_03410	Methyltransferase, FkbM family. (321 aa)
	norM	Na(+)/drug antiporter. (456 aa)
	cuyA_2	L-cysteate sulfo-lyase. (340 aa)
	LuPra_03550	Putative metal-dependent hydrolase of the TIM-barrel fold protein. (319 aa)
	LuPra_03932	Putative pterin-4-alpha-carbinolamine dehydratase. (100 aa)
	catD	3-oxoadipate enol-lactonase 2. (393 aa)
	pcaB	3-carboxy-cis,cis-muconate cycloisomerase. (455 aa)
	pcaG	Protocatechuate 3,4-dioxygenase alpha chain. (190 aa)
	pcaH_1	Protocatechuate 3,4-dioxygenase beta chain. (233 aa)
	catJ	3-oxoadipate CoA-transferase subunit B. (257 aa)
	catI	3-oxoadipate CoA-transferase subunit A. (275 aa)
	pcaR	Pca regulon regulatory protein. (258 aa)
	pobA	P-hydroxybenzoate hydroxylase. (394 aa)
	lcfB_2	Long-chain-fatty-acid--CoA ligase. (625 aa)
	LuPra_04021	Putative metal-dependent hydrolase of the TIM-barrel fold protein. (293 aa)
	LuPra_04023	Tannase and feruloyl esterase. (523 aa)
	pcaK	4-hydroxybenzoate transporter PcaK. (443 aa)
	gatA_6	Glutamyl-tRNA(Gln) amidotransferase subunit A. (531 aa)
	proA_2	4-hydroxy-2-oxoglutarate aldolase. (373 aa)
	LuPra_04293	Uncharacterized protein. (71 aa)
	tdh_2	L-threonine 3-dehydrogenase. (385 aa)
	pcaH_2	Protocatechuate 3,4-dioxygenase beta chain. (222 aa)
	LuPra_05231	4-carboxymuconolactone decarboxylase. (147 aa)
	LuPra_05252	4-carboxymuconolactone decarboxylase. (417 aa)
	LuPra_05473	Ureidoglycolate lyase. (248 aa)
	LuPra_05676	CdiI_2 domain-containing protein. (102 aa)
	LuPra_05677	RNAse_A_bac domain-containing protein. (231 aa)
	vapC-4	Ribonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (122 aa)
	garR	2-hydroxy-3-oxopropionate reductase. (288 aa)
	LuPra_05726	Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein. (119 aa)
	LuPra_06062	UPF0145 protein LuPra_06062; Belongs to the UPF0145 family. (106 aa)
	LuPra_06063	Putative pterin-4-alpha-carbinolamine dehydratase. (101 aa)
	thiO	Glycine oxidase. (369 aa)
	LuPra_06065	Bacterial Ig-like domain (Group 2). (247 aa)
	LuPra_06066	Uncharacterized protein. (177 aa)

Your Current Organism:

Luteitalea pratensis

NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LuPra_00025	LuPra_01879	LuPra_00025	LuPra_01879	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	0.724
LuPra_00025	LuPra_03550	LuPra_00025	LuPra_03550	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	0.769
LuPra_00025	lcfB_2	LuPra_00025	LuPra_04020	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	Long-chain-fatty-acid--CoA ligase.	0.678
LuPra_00025	pcaG	LuPra_00025	LuPra_04012	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	Protocatechuate 3,4-dioxygenase alpha chain.	0.489
LuPra_00025	pcaH_1	LuPra_00025	LuPra_04013	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	Protocatechuate 3,4-dioxygenase beta chain.	0.519
LuPra_00025	pobA	LuPra_00025	LuPra_04018	Putative metal-dependent hydrolase of the TIM-barrel fold protein.	P-hydroxybenzoate hydroxylase.	0.697
LuPra_01473	LuPra_01474	LuPra_01473	LuPra_01474	Arsenite S-adenosylmethyltransferase.	Imidazolonepropionase.	0.773
LuPra_01473	LuPra_01475	LuPra_01473	LuPra_01475	Arsenite S-adenosylmethyltransferase.	GDSL-like Lipase/Acylhydrolase.	0.565
LuPra_01473	LuPra_01476	LuPra_01473	LuPra_01476	Arsenite S-adenosylmethyltransferase.	DUF2235 domain-containing protein.	0.565
LuPra_01474	LuPra_01473	LuPra_01474	LuPra_01473	Imidazolonepropionase.	Arsenite S-adenosylmethyltransferase.	0.773
LuPra_01474	LuPra_01475	LuPra_01474	LuPra_01475	Imidazolonepropionase.	GDSL-like Lipase/Acylhydrolase.	0.565
LuPra_01474	LuPra_01476	LuPra_01474	LuPra_01476	Imidazolonepropionase.	DUF2235 domain-containing protein.	0.565
LuPra_01474	LuPra_01982	LuPra_01474	LuPra_01982	Imidazolonepropionase.	Ureidoglycolate lyase.	0.755
LuPra_01474	LuPra_05473	LuPra_01474	LuPra_05473	Imidazolonepropionase.	Ureidoglycolate lyase.	0.862
LuPra_01475	LuPra_01473	LuPra_01475	LuPra_01473	GDSL-like Lipase/Acylhydrolase.	Arsenite S-adenosylmethyltransferase.	0.565
LuPra_01475	LuPra_01474	LuPra_01475	LuPra_01474	GDSL-like Lipase/Acylhydrolase.	Imidazolonepropionase.	0.565
LuPra_01475	LuPra_01476	LuPra_01475	LuPra_01476	GDSL-like Lipase/Acylhydrolase.	DUF2235 domain-containing protein.	0.773
LuPra_01475	LuPra_01477	LuPra_01475	LuPra_01477	GDSL-like Lipase/Acylhydrolase.	N(G),N(G)-dimethylarginine dimethylaminohydrolase.	0.494
LuPra_01476	LuPra_01473	LuPra_01476	LuPra_01473	DUF2235 domain-containing protein.	Arsenite S-adenosylmethyltransferase.	0.565
LuPra_01476	LuPra_01474	LuPra_01476	LuPra_01474	DUF2235 domain-containing protein.	Imidazolonepropionase.	0.565

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