STRINGSTRING
LuPra_00025 LuPra_00025 gatA_2 gatA_2 LuPra_01879 LuPra_01879 gatA_3 gatA_3 norM norM cuyA_2 cuyA_2 LuPra_03550 LuPra_03550 catD catD pcaB pcaB pcaG pcaG pcaH_1 pcaH_1 catJ catJ catI catI pcaR pcaR pobA pobA lcfB_2 lcfB_2 LuPra_04021 LuPra_04021 LuPra_04023 LuPra_04023 pcaK pcaK gatA_6 gatA_6 pcaH_2 pcaH_2 LuPra_05231 LuPra_05231 LuPra_05252 LuPra_05252
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LuPra_00025Putative metal-dependent hydrolase of the TIM-barrel fold protein. (300 aa)
gatA_2Glutamyl-tRNA(Gln) amidotransferase subunit A. (541 aa)
LuPra_01879Putative metal-dependent hydrolase of the TIM-barrel fold protein. (336 aa)
gatA_3Glutamyl-tRNA(Gln) amidotransferase subunit A; Belongs to the amidase family. (529 aa)
norMNa(+)/drug antiporter. (456 aa)
cuyA_2L-cysteate sulfo-lyase. (340 aa)
LuPra_03550Putative metal-dependent hydrolase of the TIM-barrel fold protein. (319 aa)
catD3-oxoadipate enol-lactonase 2. (393 aa)
pcaB3-carboxy-cis,cis-muconate cycloisomerase. (455 aa)
pcaGProtocatechuate 3,4-dioxygenase alpha chain. (190 aa)
pcaH_1Protocatechuate 3,4-dioxygenase beta chain. (233 aa)
catJ3-oxoadipate CoA-transferase subunit B. (257 aa)
catI3-oxoadipate CoA-transferase subunit A. (275 aa)
pcaRPca regulon regulatory protein. (258 aa)
pobAP-hydroxybenzoate hydroxylase. (394 aa)
lcfB_2Long-chain-fatty-acid--CoA ligase. (625 aa)
LuPra_04021Putative metal-dependent hydrolase of the TIM-barrel fold protein. (293 aa)
LuPra_04023Tannase and feruloyl esterase. (523 aa)
pcaK4-hydroxybenzoate transporter PcaK. (443 aa)
gatA_6Glutamyl-tRNA(Gln) amidotransferase subunit A. (531 aa)
pcaH_2Protocatechuate 3,4-dioxygenase beta chain. (222 aa)
LuPra_052314-carboxymuconolactone decarboxylase. (147 aa)
LuPra_052524-carboxymuconolactone decarboxylase. (417 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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