(32 nodes) Mostly uncharacterized, incl. Fumarylacetoacetase-like, C-terminal, and Threonine catabolic process network (Luteitalea pratensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	dgoD_1	D-galactonate dehydratase. (404 aa)
	LuPra_01473	Arsenite S-adenosylmethyltransferase. (274 aa)
	LuPra_01474	Imidazolonepropionase. (432 aa)
	LuPra_01475	GDSL-like Lipase/Acylhydrolase. (482 aa)
	LuPra_01476	DUF2235 domain-containing protein. (800 aa)
	LuPra_01477	N(G),N(G)-dimethylarginine dimethylaminohydrolase. (260 aa)
	LuPra_01749	Uncharacterized protein. (286 aa)
	LuPra_01982	Ureidoglycolate lyase. (270 aa)
	hmgA	Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. (445 aa)
	LuPra_03061	Uncharacterized protein. (81 aa)
	adh	NADP-dependent isopropanol dehydrogenase. (366 aa)
	LuPra_03063	Beta-lactamase/D-alanine carboxypeptidase. (400 aa)
	LuPra_03162	Uncharacterized protein. (169 aa)
	bglA	Beta-glucanase. (256 aa)
	tdh_1	L-threonine 3-dehydrogenase. (343 aa)
	LuPra_03166	Collagenase. (339 aa)
	dgoD_4	D-galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (384 aa)
	phhA	Phenylalanine-4-hydroxylase. (300 aa)
	hpd	4-hydroxyphenylpyruvate dioxygenase. (382 aa)
	LuPra_03283	Uncharacterized protein. (311 aa)
	LuPra_03284	Fumarylacetoacetase. (447 aa)
	LuPra_03285	DUF218 domain-containing protein. (201 aa)
	LuPra_03932	Putative pterin-4-alpha-carbinolamine dehydratase. (100 aa)
	proA_2	4-hydroxy-2-oxoglutarate aldolase. (373 aa)
	LuPra_04293	Uncharacterized protein. (71 aa)
	tdh_2	L-threonine 3-dehydrogenase. (385 aa)
	LuPra_05473	Ureidoglycolate lyase. (248 aa)
	LuPra_06062	UPF0145 protein LuPra_06062; Belongs to the UPF0145 family. (106 aa)
	LuPra_06063	Putative pterin-4-alpha-carbinolamine dehydratase. (101 aa)
	thiO	Glycine oxidase. (369 aa)
	LuPra_06065	Bacterial Ig-like domain (Group 2). (247 aa)
	LuPra_06066	Uncharacterized protein. (177 aa)

Your Current Organism:

Luteitalea pratensis

NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LuPra_01473	LuPra_01474	LuPra_01473	LuPra_01474	Arsenite S-adenosylmethyltransferase.	Imidazolonepropionase.	0.773
LuPra_01473	LuPra_01475	LuPra_01473	LuPra_01475	Arsenite S-adenosylmethyltransferase.	GDSL-like Lipase/Acylhydrolase.	0.565
LuPra_01473	LuPra_01476	LuPra_01473	LuPra_01476	Arsenite S-adenosylmethyltransferase.	DUF2235 domain-containing protein.	0.565
LuPra_01474	LuPra_01473	LuPra_01474	LuPra_01473	Imidazolonepropionase.	Arsenite S-adenosylmethyltransferase.	0.773
LuPra_01474	LuPra_01475	LuPra_01474	LuPra_01475	Imidazolonepropionase.	GDSL-like Lipase/Acylhydrolase.	0.565
LuPra_01474	LuPra_01476	LuPra_01474	LuPra_01476	Imidazolonepropionase.	DUF2235 domain-containing protein.	0.565
LuPra_01474	LuPra_01982	LuPra_01474	LuPra_01982	Imidazolonepropionase.	Ureidoglycolate lyase.	0.755
LuPra_01474	LuPra_05473	LuPra_01474	LuPra_05473	Imidazolonepropionase.	Ureidoglycolate lyase.	0.862
LuPra_01475	LuPra_01473	LuPra_01475	LuPra_01473	GDSL-like Lipase/Acylhydrolase.	Arsenite S-adenosylmethyltransferase.	0.565
LuPra_01475	LuPra_01474	LuPra_01475	LuPra_01474	GDSL-like Lipase/Acylhydrolase.	Imidazolonepropionase.	0.565
LuPra_01475	LuPra_01476	LuPra_01475	LuPra_01476	GDSL-like Lipase/Acylhydrolase.	DUF2235 domain-containing protein.	0.773
LuPra_01475	LuPra_01477	LuPra_01475	LuPra_01477	GDSL-like Lipase/Acylhydrolase.	N(G),N(G)-dimethylarginine dimethylaminohydrolase.	0.494
LuPra_01476	LuPra_01473	LuPra_01476	LuPra_01473	DUF2235 domain-containing protein.	Arsenite S-adenosylmethyltransferase.	0.565
LuPra_01476	LuPra_01474	LuPra_01476	LuPra_01474	DUF2235 domain-containing protein.	Imidazolonepropionase.	0.565
LuPra_01476	LuPra_01475	LuPra_01476	LuPra_01475	DUF2235 domain-containing protein.	GDSL-like Lipase/Acylhydrolase.	0.773
LuPra_01476	LuPra_01477	LuPra_01476	LuPra_01477	DUF2235 domain-containing protein.	N(G),N(G)-dimethylarginine dimethylaminohydrolase.	0.495
LuPra_01477	LuPra_01475	LuPra_01477	LuPra_01475	N(G),N(G)-dimethylarginine dimethylaminohydrolase.	GDSL-like Lipase/Acylhydrolase.	0.494
LuPra_01477	LuPra_01476	LuPra_01477	LuPra_01476	N(G),N(G)-dimethylarginine dimethylaminohydrolase.	DUF2235 domain-containing protein.	0.495
LuPra_01982	LuPra_01474	LuPra_01982	LuPra_01474	Ureidoglycolate lyase.	Imidazolonepropionase.	0.755
LuPra_01982	hmgA	LuPra_01982	LuPra_02042	Ureidoglycolate lyase.	Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.	0.801

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