STRINGSTRING
rspA_1 rspA_1 uxuA_1 uxuA_1 uxuA_2 uxuA_2 rspA_2 rspA_2 uxaA uxaA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rspA_1Starvation-sensing protein RspA. (455 aa)
uxuA_1Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (359 aa)
uxuA_2Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (373 aa)
rspA_2Starvation-sensing protein RspA. (402 aa)
uxaAAltronate dehydratase. (522 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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