STRINGSTRING
LuPra_06150 LuPra_06150 LuPra_01824 LuPra_01824 araD_1 araD_1 araD_2 araD_2 dapA_1 dapA_1 dapA_2 dapA_2 dapA_3 dapA_3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LuPra_061505-dehydro-4-deoxyglucarate dehydratase. (311 aa)
LuPra_01824Uncharacterized protein; Belongs to the DapA family. (347 aa)
araD_1L-2-keto-3-deoxyarabonate dehydratase; Belongs to the DapA family. (306 aa)
araD_2L-2-keto-3-deoxyarabonate dehydratase; Belongs to the DapA family. (302 aa)
dapA_14-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (312 aa)
dapA_24-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (302 aa)
dapA_34-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family. (312 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
Server load: low (14%) [HD]