STRINGSTRING
cpg2 cpg2 argE_2 argE_2 yxeP_1 yxeP_1 dapE_1 dapE_1 LuPra_02258 LuPra_02258 amaB_1 amaB_1 LuPra_02432 LuPra_02432 yxeP_2 yxeP_2 abgB_3 abgB_3 dapE_2 dapE_2 dapE_3 dapE_3 amaB_2 amaB_2 argE_1 argE_1 dapE_4 dapE_4 dapE_5 dapE_5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cpg2Carboxypeptidase G2. (381 aa)
argE_2Acetylornithine deacetylase. (333 aa)
yxeP_1Putative hydrolase YxeP. (429 aa)
dapE_1Putative succinyl-diaminopimelate desuccinylase. (435 aa)
LuPra_02258Putative hydrolase. (412 aa)
amaB_1N-carbamoyl-L-amino acid hydrolase. (404 aa)
LuPra_02432Succinyl-diaminopimelate desuccinylase. (505 aa)
yxeP_2Putative hydrolase YxeP. (209 aa)
abgB_3P-aminobenzoyl-glutamate hydrolase subunit B. (556 aa)
dapE_2Succinyl-diaminopimelate desuccinylase. (433 aa)
dapE_3Putative succinyl-diaminopimelate desuccinylase. (478 aa)
amaB_2N-carbamoyl-L-amino acid hydrolase. (451 aa)
argE_1Acetylornithine deacetylase. (377 aa)
dapE_4Putative succinyl-diaminopimelate desuccinylase. (478 aa)
dapE_5Succinyl-diaminopimelate desuccinylase. (457 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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