STRINGSTRING
hldE_4 hldE_4 gltX1_1 gltX1_1 tyrS tyrS queC_1 queC_1 gluQ gluQ argG_1 argG_1 queC_2 queC_2 LuPra_01255 LuPra_01255 glnS glnS LuPra_01438 LuPra_01438 cysD cysD cysH cysH LuPra_02304 LuPra_02304 LuPra_02347 LuPra_02347 LuPra_02374 LuPra_02374 LuPra_02617 LuPra_02617 kdpD_2 kdpD_2 asnB_1 asnB_1 asnB_2 asnB_2 ttcA ttcA metG metG guaA guaA nadE nadE coaD coaD mnmA mnmA LuPra_03993 LuPra_03993 tilS tilS cysS cysS ribF ribF leuS leuS etfA etfA etfB etfB argS argS valS valS trpS trpS LuPra_04718 LuPra_04718 gltX1_2 gltX1_2 hldE_2 hldE_2 LuPra_05318 LuPra_05318 argG_2 argG_2 nadD nadD ileS ileS LuPra_06231 LuPra_06231 asnO asnO
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hldE_4Bifunctional protein HldE. (163 aa)
gltX1_1Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. (521 aa)
tyrSTyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily. (403 aa)
queC_17-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (230 aa)
gluQGlutamyl-Q tRNA(Asp) synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (285 aa)
argG_1Argininosuccinate synthase. (342 aa)
queC_27-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family. (222 aa)
LuPra_01255ATP-utilizing enzymes of the PP-loop superfamily protein. (289 aa)
glnSGlutamine--tRNA ligase. (570 aa)
LuPra_01438Universal stress proteinc. (169 aa)
cysDSulfate adenylyltransferase. (302 aa)
cysHPhosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (233 aa)
LuPra_02304Diphthami_syn_2 domain-containing protein. (230 aa)
LuPra_02347Asparagine synthase (Glutamine-hydrolyzing). (442 aa)
LuPra_02374DUF218 domain-containing protein. (220 aa)
LuPra_02617Universal stress protein family protein. (142 aa)
kdpD_2Sensor protein KdpD. (376 aa)
asnB_1Asparagine synthetase [glutamine-hydrolyzing] 1. (607 aa)
asnB_2Asparagine synthetase [glutamine-hydrolyzing] 1. (642 aa)
ttcAtRNA 2-thiocytidine biosynthesis protein TtcA; Belongs to the TtcA family. (292 aa)
metGMethionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. (678 aa)
guaAGMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. (528 aa)
nadEGlutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (547 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (166 aa)
mnmAtRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34. (358 aa)
LuPra_03993Universal stress protein. (166 aa)
tilStRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family. (474 aa)
cysSCysteine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (471 aa)
ribFRiboflavin biosynthesis protein; Belongs to the ribF family. (324 aa)
leuSLeucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (854 aa)
etfAElectron transfer flavoprotein large subunit. (317 aa)
etfBElectron transfer flavoprotein small subunit. (256 aa)
argSArginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (674 aa)
valSValine--tRNA ligase. (867 aa)
trpSTryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. (329 aa)
LuPra_04718Universal stress protein family protein. (316 aa)
gltX1_2Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu). (503 aa)
hldE_2Bifunctional protein HldE. (160 aa)
LuPra_05318Light-independent protochlorophyllide reductase subunit B. (683 aa)
argG_2Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. (411 aa)
nadDProbable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (232 aa)
ileSIsoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (932 aa)
LuPra_06231Deoxyribodipyrimidine photolyase. (519 aa)
asnOAsparagine synthetase [glutamine-hydrolyzing] 3. (598 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.