(94 nodes) S-adenosyl-L-methionine-dependent methyltransferase superfamily network (Luteitalea pratensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	ubiE_3	Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (250 aa)
	bioC	Malonyl-CoA O-methyltransferase BioC. (269 aa)
	LuPra_00274	Uncharacterized protein. (262 aa)
	LuPra_00507	Methyltransferase domain protein. (182 aa)
	ubiG_1	3-demethylubiquinone-9 3-methyltransferase. (276 aa)
	ycgJ_1	Putative methyltransferase YcgJ. (292 aa)
	bspRIM	Modification methylase BspRI; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (531 aa)
	LuPra_00605	Bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase. (308 aa)
	tehB_1	Tellurite methyltransferase. (204 aa)
	ubiE_1	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE. (228 aa)
	ubiE_2	Demethylmenaquinone methyltransferase. (266 aa)
	ubiE_6	Arsenite S-adenosylmethyltransferase. (213 aa)
	speE_2	Spermidine synthase. (685 aa)
	LuPra_03221	Spermidine synthase. (223 aa)
	LuPra_03260	Spermidine synthase. (696 aa)
	LuPra_03299	Putative S-adenosylmethionine-dependent methyltransferase. (238 aa)
	LuPra_03302	Uncharacterized protein. (278 aa)
	LuPra_03340	Uncharacterized protein. (302 aa)
	ubiG_2	3-demethylubiquinone-9 3-methyltransferase. (264 aa)
	LuPra_03410	Methyltransferase, FkbM family. (321 aa)
	LuPra_03413	Methyltransferase domain protein. (239 aa)
	ycgJ_3	Putative methyltransferase YcgJ. (322 aa)
	ycgJ_4	Putative methyltransferase YcgJ. (350 aa)
	mfpsA	Mannosylfructose-phosphate synthase. (1607 aa)
	pcm	Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (231 aa)
	rsmD	Ribosomal RNA small subunit methyltransferase D. (185 aa)
	rsmA	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (272 aa)
	rsmB	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (467 aa)
	LuPra_03851	Uncharacterized protein. (242 aa)
	LuPra_03872	O-methyltransferase. (238 aa)
	LuPra_04026	Uncharacterized protein. (82 aa)
	LuPra_04031	Mg-protoporphyrin IX methyl transferase. (217 aa)
	as3mt	Arsenite S-adenosylmethyltransferase. (318 aa)
	rebM_4	Demethylrebeccamycin-D-glucose O-methyltransferase. (262 aa)
	rlmL	Ribosomal RNA large subunit methyltransferase K/L. (405 aa)
	tehB_2	Tellurite methyltransferase. (208 aa)
	prmA_3	Ribosomal protein L11 methyltransferase. (290 aa)
	ubiE_7	Demethylmenaquinone methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (251 aa)
	rlmCD	23S rRNA (Uracil-C(5))-methyltransferase RlmCD; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. (430 aa)
	egtD	Histidine-specific methyltransferase EgtD. (343 aa)
	LuPra_04885	Putative S-adenosylmethionine-dependent methyltransferase. (309 aa)
	LuPra_04956	Methionine biosynthesis protein MetW. (531 aa)
	LuPra_04962	Methyltransferase domain protein. (222 aa)
	LuPra_04966	Methyltransferase, FkbM family. (263 aa)
	LuPra_04987	Methyltransferase domain protein. (241 aa)
	ubiG_3	3-demethylubiquinone-9 3-methyltransferase. (576 aa)
	LuPra_05023	Protein-L-isoaspartate O-methyltransferase. (256 aa)
	LuPra_05029	Putative S-adenosylmethionine-dependent methyltransferase. (238 aa)
	cfa_2	Cyclopropane-fatty-acyl-phospholipid synthase. (422 aa)
	LuPra_05236	Methyltransferase domain protein. (264 aa)
	LuPra_05259	Mg-protoporphyrin IX methyl transferase. (219 aa)
	LuPra_05582	O-methyltransferase. (389 aa)
	rsmH_1	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (313 aa)
	dam	Site-specific DNA-methyltransferase (adenine-specific). (260 aa)
	ubiE_8	Ubiquinone/menaquinone biosynthesis methyltransferase ubiE. (270 aa)
	prmC	Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (279 aa)
	rlmI	Ribosomal RNA large subunit methyltransferase I. (395 aa)
	rsmH_2	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. (294 aa)
	LuPra_05930	Methyltransf_25 domain-containing protein. (336 aa)
	LuPra_06047	Type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family. (1075 aa)
	dpnM	Site-specific DNA-methyltransferase (adenine-specific). (269 aa)
	tylE	Demethylmacrocin O-methyltransferase. (269 aa)
	noeI	2-O-methyltransferase NoeI. (243 aa)
	rsmG	Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family. (220 aa)
	LuPra_01004	O-methyltransferase. (282 aa)
	tcmN_1	Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN. (337 aa)
	speE_1	Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (500 aa)
	cadC_4	Transcriptional activator CadC. (377 aa)
	LuPra_01308	Putative S-adenosylmethionine-dependent methyltransferase. (442 aa)
	LuPra_01430	Uncharacterized protein. (495 aa)
	glpE	Thiosulfate sulfurtransferase GlpE. (284 aa)
	LuPra_01473	Arsenite S-adenosylmethyltransferase. (274 aa)
	LuPra_01585	O-methyltransferase. (196 aa)
	LuPra_01776	Ketopantoate hydroxymethyltransferase. (304 aa)
	prmA_1	Ribosomal protein L11 methyltransferase. (191 aa)
	LuPra_01795	Trans-aconitate 2-methyltransferase. (211 aa)
	ycgJ_2	Putative methyltransferase YcgJ. (264 aa)
	LuPra_01864	Ubiquinone/menaquinone biosynthesis methyltransferase. (201 aa)
	rebM_1	Demethylrebeccamycin-D-glucose O-methyltransferase. (261 aa)
	ubiE_4	Demethylmenaquinone methyltransferase. (123 aa)
	LuPra_02090	Type IV pilus biogenesis/stability protein PilW. (437 aa)
	rebM_2	Demethylrebeccamycin-D-glucose O-methyltransferase. (242 aa)
	dnrK	Carminomycin 4-O-methyltransferase. (343 aa)
	rebM_3	Demethylrebeccamycin-D-glucose O-methyltransferase. (267 aa)
	tcmN_2	Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN. (344 aa)
	LuPra_02189	Arsenite S-adenosylmethyltransferase. (265 aa)
	cfa_1	Cyclopropane-fatty-acyl-phospholipid synthase. (284 aa)
	LuPra_02395	Biotin biosynthesis protein BioC. (251 aa)
	tcmN_3	Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN. (380 aa)
	LuPra_02843	Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase. (247 aa)
	tlyA	16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA. (254 aa)
	LuPra_02949	Uncharacterized protein. (423 aa)
	prmA_2	Ribosomal protein L11 methyltransferase. (200 aa)
	ubiE_5	Demethylmenaquinone methyltransferase. (233 aa)

Your Current Organism:

Luteitalea pratensis

NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LuPra_01776	rsmA	LuPra_01776	LuPra_03716	Ketopantoate hydroxymethyltransferase.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.662
LuPra_01776	rsmH_1	LuPra_01776	LuPra_05783	Ketopantoate hydroxymethyltransferase.	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.483
LuPra_01776	rsmH_2	LuPra_01776	LuPra_05915	Ketopantoate hydroxymethyltransferase.	Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.	0.549
LuPra_01795	LuPra_02395	LuPra_01795	LuPra_02395	Trans-aconitate 2-methyltransferase.	Biotin biosynthesis protein BioC.	0.435
LuPra_02189	rsmA	LuPra_02189	LuPra_03716	Arsenite S-adenosylmethyltransferase.	Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.424
LuPra_02189	rsmB	LuPra_02189	LuPra_03747	Arsenite S-adenosylmethyltransferase.	Ribosomal RNA small subunit methyltransferase B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.444
LuPra_02395	LuPra_01795	LuPra_02395	LuPra_01795	Biotin biosynthesis protein BioC.	Trans-aconitate 2-methyltransferase.	0.435
LuPra_02843	ubiE_2	LuPra_02843	LuPra_00691	Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase.	Demethylmenaquinone methyltransferase.	0.425
LuPra_02843	ubiG_2	LuPra_02843	LuPra_03405	Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase.	3-demethylubiquinone-9 3-methyltransferase.	0.447
LuPra_03299	LuPra_03302	LuPra_03299	LuPra_03302	Putative S-adenosylmethionine-dependent methyltransferase.	Uncharacterized protein.	0.469
LuPra_03302	LuPra_03299	LuPra_03302	LuPra_03299	Uncharacterized protein.	Putative S-adenosylmethionine-dependent methyltransferase.	0.469
LuPra_04026	dnrK	LuPra_04026	LuPra_02125	Uncharacterized protein.	Carminomycin 4-O-methyltransferase.	0.641
LuPra_04026	tcmN_1	LuPra_04026	LuPra_01028	Uncharacterized protein.	Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN.	0.611
LuPra_04026	tcmN_3	LuPra_04026	LuPra_02748	Uncharacterized protein.	Multifunctional cyclase-dehydratase-3-O-methyl transferase TcmN.	0.773
LuPra_04885	LuPra_05029	LuPra_04885	LuPra_05029	Putative S-adenosylmethionine-dependent methyltransferase.	Putative S-adenosylmethionine-dependent methyltransferase.	0.534
LuPra_04885	ubiG_2	LuPra_04885	LuPra_03405	Putative S-adenosylmethionine-dependent methyltransferase.	3-demethylubiquinone-9 3-methyltransferase.	0.424
LuPra_04956	LuPra_04962	LuPra_04956	LuPra_04962	Methionine biosynthesis protein MetW.	Methyltransferase domain protein.	0.484
LuPra_04962	LuPra_04956	LuPra_04962	LuPra_04956	Methyltransferase domain protein.	Methionine biosynthesis protein MetW.	0.484
LuPra_05029	LuPra_04885	LuPra_05029	LuPra_04885	Putative S-adenosylmethionine-dependent methyltransferase.	Putative S-adenosylmethionine-dependent methyltransferase.	0.534
LuPra_05029	rebM_1	LuPra_05029	LuPra_01962	Putative S-adenosylmethionine-dependent methyltransferase.	Demethylrebeccamycin-D-glucose O-methyltransferase.	0.464

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