STRINGSTRING
tdh_2 tdh_2 fdm_1 fdm_1 neoA neoA LuPra_01092 LuPra_01092 LuPra_01725 LuPra_01725 LuPra_02032 LuPra_02032 adh adh LuPra_03105 LuPra_03105 tdh_1 tdh_1 qorA_1 qorA_1 fdm_2 fdm_2 yahK yahK tdh_3 tdh_3 qorA_2 qorA_2 LuPra_05695 LuPra_05695
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tdh_2L-threonine 3-dehydrogenase. (385 aa)
fdm_1Formaldehyde dismutase. (389 aa)
neoA2-deoxy-scyllo-inosamine dehydrogenase. (347 aa)
LuPra_01092Alcohol dehydrogenase. (360 aa)
LuPra_01725S-(Hydroxymethyl)mycothiol dehydrogenase. (338 aa)
LuPra_02032Alcohol dehydrogenase. (330 aa)
adhNADP-dependent isopropanol dehydrogenase. (366 aa)
LuPra_03105D-arabitol-phosphate dehydrogenase. (356 aa)
tdh_1L-threonine 3-dehydrogenase. (343 aa)
qorA_1Quinone oxidoreductase 1. (325 aa)
fdm_2Formaldehyde dismutase. (422 aa)
yahKPutative zinc-type alcohol dehydrogenase-like protein YahK. (364 aa)
tdh_3L-threonine 3-dehydrogenase. (350 aa)
qorA_2Quinone oxidoreductase 1. (370 aa)
LuPra_05695S-(Hydroxymethyl)mycothiol dehydrogenase. (371 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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