STRINGSTRING
iolA iolA glxR glxR LuPra_01453 LuPra_01453 mutB mutB lcfB_1 lcfB_1 thlA_1 thlA_1 dat_1 dat_1 thlA_2 thlA_2 scoB scoB scoA scoA LuPra_04310 LuPra_04310 paaF_1 paaF_1 accA1_1 accA1_1 yngG yngG scpA_2 scpA_2 scpA_3 scpA_3 lpdA lpdA accD5 accD5 garR garR ilvK ilvK bfmBAB bfmBAB fadA fadA lpdG lpdG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
iolAMethylmalonate semialdehyde dehydrogenase [acylating]. (486 aa)
glxR2-hydroxy-3-oxopropionate reductase. (309 aa)
LuPra_01453Methylmalonyl-CoA epimerase. (155 aa)
mutBMethylmalonyl-CoA mutase large subunit. (1012 aa)
lcfB_1Long-chain-fatty-acid--CoA ligase. (491 aa)
thlA_1Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (460 aa)
dat_1D-alanine aminotransferase. (295 aa)
thlA_2Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
scoBPutative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B. (225 aa)
scoAPutative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A. (230 aa)
LuPra_04310Methylmalonyl-CoA carboxyltransferase 12S subunit. (535 aa)
paaF_12,3-dehydroadipyl-CoA hydratase. (264 aa)
accA1_1Acetyl-/propionyl-coenzyme A carboxylase alpha chain. (512 aa)
yngGHydroxymethylglutaryl-CoA lyase YngG. (314 aa)
scpA_2Methylmalonyl-CoA mutase. (137 aa)
scpA_3Methylmalonyl-CoA mutase. (534 aa)
lpdADihydrolipoyl dehydrogenase. (472 aa)
accD5Putative propionyl-CoA carboxylase beta chain 5. (516 aa)
garR2-hydroxy-3-oxopropionate reductase. (288 aa)
ilvKBranched-chain-amino-acid aminotransferase 2. (360 aa)
bfmBAB2-oxoisovalerate dehydrogenase subunit beta. (708 aa)
fadAAcetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
lpdGDihydrolipoyl dehydrogenase. (475 aa)
Your Current Organism:
Luteitalea pratensis
NCBI taxonomy Id: 1855912
Other names: Acidobacteria bacterium DSM 100886, Acidobacteria bacterium HEG_-6_39, DSM 100886, KCTC 52215, L. pratensis, Luteitalea pratensis Vieira et al. 2017, strain HEG_-6_39
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