STRINGSTRING
edd edd glk glk THL1_1529 THL1_1529 zwf zwf pgl pgl THL1_1532 THL1_1532 THL1_1533 THL1_1533 THL1_1654 THL1_1654 THL1_1895 THL1_1895 THL1_1896 THL1_1896 THL1_2004 THL1_2004 THL1_2140 THL1_2140 THL1_321 THL1_321 pgk pgk THL1_325 THL1_325 tal tal eno eno pgi pgi tpiA tpiA fbp fbp gpmI gpmI THL1_5665 THL1_5665 zwf-2 zwf-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
eddPhosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family. (608 aa)
glkGlucokinase; Belongs to the bacterial glucokinase family. (322 aa)
THL1_1529Transcriptional regulator. (289 aa)
zwfGlucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (489 aa)
pgl6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. (237 aa)
THL1_1532Keto-deoxy-phosphogluconate aldolase. (229 aa)
THL1_1533Aldehyde dehydrogenase. (541 aa)
THL1_1654Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (332 aa)
THL1_1895Pyruvate kinase; Belongs to the pyruvate kinase family. (471 aa)
THL1_1896Glycerate 2-kinase. (426 aa)
THL1_20042-dehydro-3-deoxyphosphogluconate aldolase. (216 aa)
THL1_2140Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (514 aa)
THL1_321Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (666 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (387 aa)
THL1_325Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (354 aa)
talTransaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (308 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (429 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (554 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
fbpFructose 1,6-bisphosphatase; Belongs to the FBPase class 1 family. (336 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (511 aa)
THL1_5665Aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (302 aa)
zwf-2Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (480 aa)
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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