STRINGSTRING
THL1_101 THL1_101 leuA leuA purU purU THL1_1293 THL1_1293 THL1_1294 THL1_1294 fumC fumC THL1_1409 THL1_1409 THL1_1540 THL1_1540 leuC leuC leuD leuD leuB leuB ilvD ilvD THL1_2172 THL1_2172 THL1_2173 THL1_2173 THL1_2174 THL1_2174 THL1_2175 THL1_2175 THL1_2176 THL1_2176 THL1_2177 THL1_2177 THL1_2178 THL1_2178 THL1_2179 THL1_2179 sucC sucC sucD sucD mdh mdh THL1_2322 THL1_2322 THL1_2382 THL1_2382 mqo mqo THL1_2431 THL1_2431 THL1_2473 THL1_2473 THL1_2474 THL1_2474 THL1_2739 THL1_2739 THL1_2783 THL1_2783 ilvA ilvA THL1_2811 THL1_2811 THL1_2922 THL1_2922 THL1_2923 THL1_2923 THL1_2924 THL1_2924 THL1_2925 THL1_2925 THL1_2926 THL1_2926 THL1_2942 THL1_2942 THL1_3205 THL1_3205 THL1_3206 THL1_3206 THL1_3207 THL1_3207 THL1_3360 THL1_3360 THL1_3422 THL1_3422 THL1_3425 THL1_3425 THL1_357 THL1_357 THL1_358 THL1_358 THL1_359 THL1_359 THL1_360 THL1_360 THL1_3656 THL1_3656 THL1_3677 THL1_3677 THL1_3678 THL1_3678 THL1_3679 THL1_3679 prpB prpB THL1_3795 THL1_3795 purU-4 purU-4 THL1_3995 THL1_3995 THL1_3997 THL1_3997 THL1_3998 THL1_3998 THL1_4272 THL1_4272 lipA lipA THL1_4508 THL1_4508 THL1_4602 THL1_4602 ppc ppc THL1_4675 THL1_4675 THL1_4679 THL1_4679 THL1_4745 THL1_4745 THL1_4746 THL1_4746 pdhA pdhA THL1_4748 THL1_4748 kynU kynU THL1_479 THL1_479 mqo-2 mqo-2 leuA-2 leuA-2 ilvC ilvC THL1_4878 THL1_4878 THL1_4879 THL1_4879 lldD lldD THL1_5093 THL1_5093 THL1_5094 THL1_5094 THL1_5095 THL1_5095 THL1_5096 THL1_5096 THL1_5159 THL1_5159 ilvE ilvE THL1_5278 THL1_5278 THL1_5279 THL1_5279 THL1_5308 THL1_5308 pckA pckA THL1_5686 THL1_5686 THL1_5687 THL1_5687 lipB lipB lipA-2 lipA-2
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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experimentally determined
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gene neighborhood
gene fusions
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THL1_101acetyl-CoA hydrolase. (497 aa)
leuA2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. (556 aa)
purUFormyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (283 aa)
THL1_1293Hypothetical protein. (141 aa)
THL1_1294Hypothetical protein. (56 aa)
fumCFumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (464 aa)
THL1_1409Hypothetical protein; Belongs to the alpha-IPM synthase/homocitrate synthase family. (407 aa)
THL1_1540Esterase. (289 aa)
leuCIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (474 aa)
leuD3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (214 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (360 aa)
ilvDDihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (612 aa)
THL1_2172Type II citrate synthase; Belongs to the citrate synthase family. (428 aa)
THL1_2173Succinate dehydrogenase. (124 aa)
THL1_2174Succinate dehydrogenase; Membrane-anchoring subunit of succinate dehydrogenase (SDH). (122 aa)
THL1_2175Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (590 aa)
THL1_2176Succinate dehydrogenase. (238 aa)
THL1_21772-oxoglutarate dehydrogenase. (943 aa)
THL1_21782-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (405 aa)
THL1_2179Dihydrolipoamide dehydrogenase. (478 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (389 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
mdhMalate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. (321 aa)
THL1_2322Aspartate aminotransferase. (403 aa)
THL1_2382Lipoate--protein ligase. (236 aa)
mqoMalate:quinone oxidoreductase. (525 aa)
THL1_2431Dihydrolipoamide dehydrogenase. (469 aa)
THL1_2473Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family. (742 aa)
THL1_2474Isocitrate dehydrogenase. (418 aa)
THL1_2739Thiamine pyrophosphate-dependent enzyme,possible carboligase or decarboxylase; Belongs to the TPP enzyme family. (560 aa)
THL1_27832-methylcitrate dehydratase. (494 aa)
ilvAThreonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (526 aa)
THL1_2811Hypothetical protein; Belongs to the TPP enzyme family. (536 aa)
THL1_2922Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (329 aa)
THL1_2923Pyruvate dehydrogenase. (341 aa)
THL1_2924Biotin attachment protein. (77 aa)
THL1_2925Acetoin dehydrogenase. (234 aa)
THL1_2926Lipoate--protein ligase. (244 aa)
THL1_29422-methylcitrate dehydratase. (446 aa)
THL1_3205Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily. (288 aa)
THL1_3206Fumarate hydrolyase. (202 aa)
THL1_3207Tartrate dehydratase subunit alpha. (299 aa)
THL1_3360Acetolactate synthase; Belongs to the TPP enzyme family. (547 aa)
THL1_3422Malate dehydrogenase; Belongs to the malic enzymes family. (246 aa)
THL1_3425Hypothetical protein. (151 aa)
THL1_357Formate dehydrogenase. (160 aa)
THL1_358Formate dehydrogenase. (519 aa)
THL1_359Formate dehydrogenase. (958 aa)
THL1_360Formate dehydrogenase. (73 aa)
THL1_3656Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family. (884 aa)
THL1_36773-methylitaconate isomerase. (395 aa)
THL1_3678Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (876 aa)
THL1_3679Methylcitrate synthase; Belongs to the citrate synthase family. (385 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (294 aa)
THL1_3795Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (896 aa)
purU-4Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). (287 aa)
THL1_3995MFS transporter. (378 aa)
THL1_3997Aspartate aminotransferase. (396 aa)
THL1_3998Decarboxylase; Belongs to the TPP enzyme family. (536 aa)
THL1_4272Amino acid dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (350 aa)
lipALipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (324 aa)
THL1_45082-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)
THL1_46022-methylisocitrate lyase. (275 aa)
ppcPhosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. (878 aa)
THL1_4675Pyruvate kinase; Belongs to the pyruvate kinase family. (483 aa)
THL1_4679Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (507 aa)
THL1_4745Branched-chain alpha-keto acid dehydrogenase subunit E2. (368 aa)
THL1_47462-oxoisovalerate dehydrogenase. (333 aa)
pdhAABC transporter permease; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (363 aa)
THL1_4748Amino acid dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (339 aa)
kynUKynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively. (414 aa)
THL1_479Amino acid permease. (471 aa)
mqo-2Malate:quinone oxidoreductase. (505 aa)
leuA-22-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily. (516 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (338 aa)
THL1_4878Acetolactate synthase 3 regulatory subunit. (163 aa)
THL1_4879Acetolactate synthase 3 catalytic subunit. (615 aa)
lldDLactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain. (381 aa)
THL1_5093Formate dehydrogenase gamma subunit. (210 aa)
THL1_5094Formate dehydrogenase subunit beta; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers. (308 aa)
THL1_5095Formate dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (811 aa)
THL1_5096Sulfate ABC transporter substrate-bindingprotein. (272 aa)
THL1_5159Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily. (288 aa)
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (307 aa)
THL1_5278Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (881 aa)
THL1_5279Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (648 aa)
THL1_5308Malate dehydrogenase. (422 aa)
pckAHypothetical protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (514 aa)
THL1_5686Pyruvate carboxylase subunit B. (601 aa)
THL1_5687Pyruvate carboxylase subunit A; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (471 aa)
lipBLipoate--protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (208 aa)
lipA-2Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (350 aa)
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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