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THL1_1358 THL1_1358 THL1_1609 THL1_1609 truA truA THL1_2432 THL1_2432 THL1_2735 THL1_2735 THL1_3781 THL1_3781 THL1_3891 THL1_3891 truD truD truB truB THL1_877 THL1_877 THL1_998 THL1_998
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
THL1_1358Pseudouridine synthase. (211 aa)
THL1_1609Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (230 aa)
truAtRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (285 aa)
THL1_2432Pseudouridine synthase. (293 aa)
THL1_2735RNA-binding protein S4. (236 aa)
THL1_378123S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (317 aa)
THL1_3891Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (442 aa)
truDPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family. (352 aa)
truBPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. (305 aa)
THL1_877Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (188 aa)
THL1_998Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (324 aa)
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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