STRINGSTRING
THL1_5028 THL1_5028 THL1_5709 THL1_5709 THL1_1590 THL1_1590 THL1_189 THL1_189 THL1_2768 THL1_2768 bioA bioA THL1_3858 THL1_3858 THL1_4008 THL1_4008 THL1_5608 THL1_5608
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
THL1_5028Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
THL1_5709Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (463 aa)
THL1_1590Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)
THL1_189Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (455 aa)
THL1_2768Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)
bioAAdenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. (468 aa)
THL1_3858Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)
THL1_4008Aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (472 aa)
THL1_5608Omega amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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