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THL1_1413 THL1_1413 THL1_1415 THL1_1415 THL1_1418 THL1_1418 THL1_1428 THL1_1428 accD accD fadB fadB THL1_2179 THL1_2179 sucC sucC sucD sucD THL1_2275 THL1_2275 THL1_2276 THL1_2276 THL1_2284 THL1_2284 THL1_2288 THL1_2288 THL1_2289 THL1_2289 THL1_2290 THL1_2290 THL1_2316 THL1_2316 THL1_2431 THL1_2431 THL1_2743 THL1_2743 THL1_2783 THL1_2783 THL1_2900 THL1_2900 THL1_3165 THL1_3165 THL1_3166 THL1_3166 THL1_3167 THL1_3167 THL1_3169 THL1_3169 THL1_3186 THL1_3186 THL1_3229 THL1_3229 THL1_3486 THL1_3486 THL1_3523 THL1_3523 THL1_3537 THL1_3537 THL1_3612 THL1_3612 THL1_3656 THL1_3656 THL1_3677 THL1_3677 THL1_3678 THL1_3678 THL1_3679 THL1_3679 prpB prpB THL1_3999 THL1_3999 THL1_4135 THL1_4135 THL1_4136 THL1_4136 THL1_4177 THL1_4177 THL1_4219 THL1_4219 THL1_4220 THL1_4220 THL1_4237 THL1_4237 THL1_4239 THL1_4239 acsA acsA THL1_4332 THL1_4332 accA accA THL1_457 THL1_457 THL1_4579 THL1_4579 THL1_4596 THL1_4596 ackA ackA THL1_4778 THL1_4778 THL1_4793 THL1_4793 acsA-2 acsA-2 THL1_5026 THL1_5026 THL1_5028 THL1_5028 THL1_5072 THL1_5072 THL1_5132 THL1_5132 THL1_5133 THL1_5133 THL1_5608 THL1_5608
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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THL1_1413enoyl-CoA hydratase. (288 aa)
THL1_1415enoyl-CoA hydratase. (252 aa)
THL1_1418acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (382 aa)
THL1_1428acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
accDacetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (290 aa)
fadBMultifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
THL1_2179Dihydrolipoamide dehydrogenase. (478 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (389 aa)
sucDsuccinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (295 aa)
THL1_22753-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
THL1_22763-hydroxyacyl-CoA dehydrogenase. (714 aa)
THL1_2284enoyl-CoA hydratase. (229 aa)
THL1_2288enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
THL1_2289Methylmalonate-semialdehyde dehydrogenase. (502 aa)
THL1_2290acetyl-CoA synthetase. (567 aa)
THL1_2316enoyl-CoA hydratase. (263 aa)
THL1_2431Dihydrolipoamide dehydrogenase. (469 aa)
THL1_27434-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (416 aa)
THL1_27832-methylcitrate dehydratase. (494 aa)
THL1_2900Alcohol dehydrogenase. (327 aa)
THL1_3165enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
THL1_31662-methyl-branched-chain-enoyl-CoA reductase. (375 aa)
THL1_3167acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
THL1_3169AMP-binding protein. (539 aa)
THL1_31862,3-dehydroadipyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
THL1_3229acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
THL1_3486Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
THL1_3523Methylmalonate-semialdehyde dehydrogenase. (498 aa)
THL1_3537enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
THL1_3612enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
THL1_3656Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family. (884 aa)
THL1_36773-methylitaconate isomerase. (395 aa)
THL1_3678Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. (876 aa)
THL1_3679Methylcitrate synthase; Belongs to the citrate synthase family. (385 aa)
prpB2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family. (294 aa)
THL1_3999Hypothetical protein. (705 aa)
THL1_4135Methylmalonate-semialdehyde dehydrogenase. (501 aa)
THL1_4136enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
THL1_4177Beta-ketothiolase; Belongs to the thiolase-like superfamily. Thiolase family. (395 aa)
THL1_42193-hydroxyacyl-CoA dehydrogenase. (715 aa)
THL1_42203-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (402 aa)
THL1_4237enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)
THL1_4239acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (400 aa)
acsAacetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (651 aa)
THL1_4332Methylmalonate-semialdehyde dehydrogenase. (497 aa)
accAacetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (316 aa)
THL1_457CoA-transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. (518 aa)
THL1_4579Aldehyde reductase. (383 aa)
THL1_4596Hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family. (277 aa)
ackAPropionate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (388 aa)
THL1_4778Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. (677 aa)
THL1_4793acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
acsA-2acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
THL1_5026Methylmalonate-semialdehyde dehydrogenase. (498 aa)
THL1_5028Beta-alanine--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (448 aa)
THL1_5072acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (425 aa)
THL1_5132acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (154 aa)
THL1_5133acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
THL1_5608Omega amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)
Your Current Organism:
Pseudomonas sp. TCUHL1
NCBI taxonomy Id: 1856685
Other names: P. sp. TCU-HL1, Pseudomonas sp. TCU-HL1
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