(6 nodes) Mixed, incl. U2AF complex, and Pre-mRNA-processing factor Prp40 network (Carlito syrichta)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:
	LUC7L	Putative RNA-binding protein Luc7-like 1 isoform X1. (371 aa)
	SNRPC	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
	PRPF40B	pre-mRNA-processing factor 40 homolog B isoform X2. (894 aa)
	U2AF2	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
	SF1	Splicing factor 1. (372 aa)
	C6orf52	Trnau1ap domain-containing protein. (141 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C6orf52	LUC7L	ENSTSYP00000032677	ENSTSYP00000009791	Trnau1ap domain-containing protein.	Putative RNA-binding protein Luc7-like 1 isoform X1.	0.891
C6orf52	PRPF40B	ENSTSYP00000032677	ENSTSYP00000012505	Trnau1ap domain-containing protein.	pre-mRNA-processing factor 40 homolog B isoform X2.	0.894
C6orf52	SF1	ENSTSYP00000032677	ENSTSYP00000026929	Trnau1ap domain-containing protein.	Splicing factor 1.	0.915
C6orf52	SNRPC	ENSTSYP00000032677	ENSTSYP00000010285	Trnau1ap domain-containing protein.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.840
C6orf52	U2AF2	ENSTSYP00000032677	ENSTSYP00000017949	Trnau1ap domain-containing protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.935
LUC7L	C6orf52	ENSTSYP00000009791	ENSTSYP00000032677	Putative RNA-binding protein Luc7-like 1 isoform X1.	Trnau1ap domain-containing protein.	0.891
LUC7L	PRPF40B	ENSTSYP00000009791	ENSTSYP00000012505	Putative RNA-binding protein Luc7-like 1 isoform X1.	pre-mRNA-processing factor 40 homolog B isoform X2.	0.944
LUC7L	SF1	ENSTSYP00000009791	ENSTSYP00000026929	Putative RNA-binding protein Luc7-like 1 isoform X1.	Splicing factor 1.	0.841
LUC7L	SNRPC	ENSTSYP00000009791	ENSTSYP00000010285	Putative RNA-binding protein Luc7-like 1 isoform X1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.896
LUC7L	U2AF2	ENSTSYP00000009791	ENSTSYP00000017949	Putative RNA-binding protein Luc7-like 1 isoform X1.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.898
PRPF40B	C6orf52	ENSTSYP00000012505	ENSTSYP00000032677	pre-mRNA-processing factor 40 homolog B isoform X2.	Trnau1ap domain-containing protein.	0.894
PRPF40B	LUC7L	ENSTSYP00000012505	ENSTSYP00000009791	pre-mRNA-processing factor 40 homolog B isoform X2.	Putative RNA-binding protein Luc7-like 1 isoform X1.	0.944
PRPF40B	SF1	ENSTSYP00000012505	ENSTSYP00000026929	pre-mRNA-processing factor 40 homolog B isoform X2.	Splicing factor 1.	0.967
PRPF40B	SNRPC	ENSTSYP00000012505	ENSTSYP00000010285	pre-mRNA-processing factor 40 homolog B isoform X2.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.847
PRPF40B	U2AF2	ENSTSYP00000012505	ENSTSYP00000017949	pre-mRNA-processing factor 40 homolog B isoform X2.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.968
SF1	C6orf52	ENSTSYP00000026929	ENSTSYP00000032677	Splicing factor 1.	Trnau1ap domain-containing protein.	0.915
SF1	LUC7L	ENSTSYP00000026929	ENSTSYP00000009791	Splicing factor 1.	Putative RNA-binding protein Luc7-like 1 isoform X1.	0.841
SF1	PRPF40B	ENSTSYP00000026929	ENSTSYP00000012505	Splicing factor 1.	pre-mRNA-processing factor 40 homolog B isoform X2.	0.967
SF1	SNRPC	ENSTSYP00000026929	ENSTSYP00000010285	Splicing factor 1.	U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]	0.545
SF1	U2AF2	ENSTSYP00000026929	ENSTSYP00000017949	Splicing factor 1.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.997