STRINGSTRING
SF3B2 SF3B2 DDX46 DDX46 SNRPA1 SNRPA1 SF3A1 SF3A1 SNRPN SNRPN MFAP1 MFAP1 DDX23 DDX23 ENSTSYP00000006242 ENSTSYP00000006242 SNRPD3 SNRPD3 LRMDA LRMDA PRPF6 PRPF6 SF3B3 SF3B3 SF3A3 SF3A3 SF3B4 SF3B4 SNRNP40 SNRNP40 PRPF4 PRPF4 SNRNP200 SNRNP200 SNRPD2 SNRPD2 SF3B5 SF3B5 SF3B6 SF3B6 PRPF8 PRPF8 TXNL4A TXNL4A ENSTSYP00000018630 ENSTSYP00000018630 SNRPD1 SNRPD1 ENSTSYP00000019264 ENSTSYP00000019264 LOC110596188 LOC110596188 ENSTSYP00000020728 ENSTSYP00000020728 PRPF3 PRPF3 SF3A2 SF3A2 LOC103263179 LOC103263179 PRPF31 PRPF31 SNRPE SNRPE SART1 SART1 SNRPG-2 SNRPG-2 LOC103249566 LOC103249566 EFTUD2 EFTUD2 PHF5A PHF5A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
DDX46Probable ATP-dependent RNA helicase DDX46. (1014 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
ENSTSYP00000006242annotation not available (43 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
LRMDALeucine-rich repeat-containing protein C10orf11 homolog. (200 aa)
PRPF6pre-mRNA-processing factor 6 isoform X1. (941 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (470 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1. (358 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2. (536 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2139 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ENSTSYP00000018630annotation not available (63 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
ENSTSYP00000019264annotation not available (114 aa)
LOC110596188U2 small nuclear ribonucleoprotein B''-like. (201 aa)
ENSTSYP00000020728annotation not available (68 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
SF3A2Splicing factor 3A subunit 2. (183 aa)
LOC103263179Uncharacterized protein LOC103263179. (119 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (502 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (693 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (77 aa)
LOC103249566U1 small nuclear ribonucleoprotein 70 kDa isoform X3. (124 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
PHF5APHD finger-like domain-containing protein 5A isoform X1. (110 aa)
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
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