STRINGSTRING
SF3B2 SF3B2 DDX46 DDX46 SNRPA1 SNRPA1 SF3A1 SF3A1 SF3B3 SF3B3 SF3A3 SF3A3 SF3B4 SF3B4 SF3B5 SF3B5 SF3B6 SF3B6 SF3A2 SF3A2 PHF5A PHF5A
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
DDX46Probable ATP-dependent RNA helicase DDX46. (1014 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (470 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
SF3A2Splicing factor 3A subunit 2. (183 aa)
PHF5APHD finger-like domain-containing protein 5A isoform X1. (110 aa)
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
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