6 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PSMA2	PSMA5	ENSTSYP00000031828	ENSTSYP00000000711	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
PSMA2	PSMA6	ENSTSYP00000031828	ENSTSYP00000014252	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.998
PSMA2	PSMB1	ENSTSYP00000031828	ENSTSYP00000001400	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA2	PSMB2	ENSTSYP00000031828	ENSTSYP00000005163	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA2	PSMB4	ENSTSYP00000031828	ENSTSYP00000007284	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
PSMA5	PSMA2	ENSTSYP00000000711	ENSTSYP00000031828	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997
PSMA5	PSMA6	ENSTSYP00000000711	ENSTSYP00000014252	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA5	PSMB1	ENSTSYP00000000711	ENSTSYP00000001400	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA5	PSMB2	ENSTSYP00000000711	ENSTSYP00000005163	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA5	PSMB4	ENSTSYP00000000711	ENSTSYP00000007284	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
PSMA6	PSMA2	ENSTSYP00000014252	ENSTSYP00000031828	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.998
PSMA6	PSMA5	ENSTSYP00000014252	ENSTSYP00000000711	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
PSMA6	PSMB1	ENSTSYP00000014252	ENSTSYP00000001400	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA6	PSMB2	ENSTSYP00000014252	ENSTSYP00000005163	Proteasome subunit alpha type.	Proteasome subunit beta.	0.999
PSMA6	PSMB4	ENSTSYP00000014252	ENSTSYP00000007284	Proteasome subunit alpha type.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
PSMB1	PSMA2	ENSTSYP00000001400	ENSTSYP00000031828	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
PSMB1	PSMA5	ENSTSYP00000001400	ENSTSYP00000000711	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
PSMB1	PSMA6	ENSTSYP00000001400	ENSTSYP00000014252	Proteasome subunit beta.	Proteasome subunit alpha type.	0.999
PSMB1	PSMB2	ENSTSYP00000001400	ENSTSYP00000005163	Proteasome subunit beta.	Proteasome subunit beta.	0.999
PSMB1	PSMB4	ENSTSYP00000001400	ENSTSYP00000007284	Proteasome subunit beta.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999