36 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	VPS4A	Vacuolar protein sorting-associated protein 4A isoform X2; Belongs to the AAA ATPase family. (437 aa)
	VPS28	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (221 aa)
	LOC103262061	Multivesicular body subunit 12B-like. (136 aa)
	TBC1D20	TBC1 domain family member 20. (386 aa)
	CHMP5	Charged multivesicular body protein 5 isoform X1. (219 aa)
	VPS37A	Vacuolar protein sorting-associated protein 37A. (355 aa)
	LRSAM1	E3 ubiquitin-protein ligase LRSAM1. (678 aa)
	CHMP7	Charged multivesicular body protein 7 isoform X1. (454 aa)
	ENSTSYP00000011178	annotation not available (227 aa)
	PDCD6IP	Programmed cell death 6-interacting protein isoform X3. (869 aa)
	CHMP4C	Charged multivesicular body protein 4c. (232 aa)
	LOC103255581	Charged multivesicular body protein 3 isoform X2. (222 aa)
	DDX6	Probable ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family. (483 aa)
	RAB43	Ras-related protein Rab-43. (153 aa)
	ENSTSYP00000017425	annotation not available (69 aa)
	LOC103265826	Pyruvate carboxylase, mitochondrial. (477 aa)
	ENSTSYP00000018132	annotation not available (196 aa)
	RAB1A	Ras-related protein Rab-1A. (210 aa)
	USP6NL	USP6 N-terminal-like protein. (851 aa)
	PC	Pyruvate carboxylase, mitochondrial. (298 aa)
	MVB12A	Multivesicular body subunit 12A. (264 aa)
	VPS37B	Vacuolar protein sorting-associated protein 37B. (284 aa)
	TSG101	Tumor susceptibility gene 101 protein isoform X2. (393 aa)
	ENSTSYP00000023323	annotation not available (193 aa)
	CHMP2B	Charged multivesicular body protein 2b. (228 aa)
	RAB1B	Ras-related protein Rab-1B. (297 aa)
	NEDD4	E3 ubiquitin-protein ligase NEDD4 isoform X1. (1321 aa)
	CHMP2A	Charged multivesicular body protein 2a. (222 aa)
	VTA1	Vacuolar protein sorting-associated protein VTA1 homolog isoform X2. (307 aa)
	ENSTSYP00000029007	annotation not available (89 aa)
	ENSTSYP00000029956	annotation not available (196 aa)
	CHMP1A	Charged multivesicular body protein 1a. (196 aa)
	CHMP6	Charged multivesicular body protein 6. (227 aa)
	ENSTSYP00000031983	annotation not available (71 aa)
	ENSTSYP00000032813	annotation not available (132 aa)
	CHMP4B	Charged multivesicular body protein 4b. (200 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHMP1A	CHMP2A	ENSTSYP00000030004	ENSTSYP00000027525	Charged multivesicular body protein 1a.	Charged multivesicular body protein 2a.	0.994
CHMP1A	CHMP2B	ENSTSYP00000030004	ENSTSYP00000024370	Charged multivesicular body protein 1a.	Charged multivesicular body protein 2b.	0.969
CHMP1A	CHMP4B	ENSTSYP00000030004	ENSTSYP00000033529	Charged multivesicular body protein 1a.	Charged multivesicular body protein 4b.	0.993
CHMP1A	CHMP4C	ENSTSYP00000030004	ENSTSYP00000012423	Charged multivesicular body protein 1a.	Charged multivesicular body protein 4c.	0.993
CHMP1A	CHMP5	ENSTSYP00000030004	ENSTSYP00000005943	Charged multivesicular body protein 1a.	Charged multivesicular body protein 5 isoform X1.	0.997
CHMP1A	CHMP6	ENSTSYP00000030004	ENSTSYP00000031823	Charged multivesicular body protein 1a.	Charged multivesicular body protein 6.	0.961
CHMP1A	CHMP7	ENSTSYP00000030004	ENSTSYP00000008845	Charged multivesicular body protein 1a.	Charged multivesicular body protein 7 isoform X1.	0.938
CHMP1A	ENSTSYP00000011178	ENSTSYP00000030004	ENSTSYP00000011178	Charged multivesicular body protein 1a.	annotation not available	0.994
CHMP1A	ENSTSYP00000017425	ENSTSYP00000030004	ENSTSYP00000017425	Charged multivesicular body protein 1a.	annotation not available	0.971
CHMP1A	ENSTSYP00000018132	ENSTSYP00000030004	ENSTSYP00000018132	Charged multivesicular body protein 1a.	annotation not available	0.991
CHMP1A	ENSTSYP00000023323	ENSTSYP00000030004	ENSTSYP00000023323	Charged multivesicular body protein 1a.	annotation not available	0.988
CHMP1A	ENSTSYP00000029007	ENSTSYP00000030004	ENSTSYP00000029007	Charged multivesicular body protein 1a.	annotation not available	0.985
CHMP1A	ENSTSYP00000029956	ENSTSYP00000030004	ENSTSYP00000029956	Charged multivesicular body protein 1a.	annotation not available	0.961
CHMP1A	ENSTSYP00000031983	ENSTSYP00000030004	ENSTSYP00000031983	Charged multivesicular body protein 1a.	annotation not available	0.552
CHMP1A	LOC103255581	ENSTSYP00000030004	ENSTSYP00000014022	Charged multivesicular body protein 1a.	Charged multivesicular body protein 3 isoform X2.	0.990
CHMP1A	LOC103262061	ENSTSYP00000030004	ENSTSYP00000003912	Charged multivesicular body protein 1a.	Multivesicular body subunit 12B-like.	0.699
CHMP1A	MVB12A	ENSTSYP00000030004	ENSTSYP00000020911	Charged multivesicular body protein 1a.	Multivesicular body subunit 12A.	0.646
CHMP1A	PDCD6IP	ENSTSYP00000030004	ENSTSYP00000011788	Charged multivesicular body protein 1a.	Programmed cell death 6-interacting protein isoform X3.	0.578
CHMP1A	TSG101	ENSTSYP00000030004	ENSTSYP00000022364	Charged multivesicular body protein 1a.	Tumor susceptibility gene 101 protein isoform X2.	0.791
CHMP1A	VPS28	ENSTSYP00000030004	ENSTSYP00000003553	Charged multivesicular body protein 1a.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.803