STRINGSTRING
RPS19 RPS19 LOC110596671 LOC110596671 DDX20 DDX20 TGS1 TGS1 MDN1 MDN1 EIF3M EIF3M SF3B2 SF3B2 LUC7L3 LUC7L3 SRSF12 SRSF12 MCTS1 MCTS1 LOC103265646 LOC103265646 DICER1 DICER1 RPL24 RPL24 GCFC2 GCFC2 SRPK2 SRPK2 LOC103252085 LOC103252085 FASTKD2 FASTKD2 ENSTSYP00000003210 ENSTSYP00000003210 DHX29 DHX29 CELF1 CELF1 EIF3H EIF3H RBM5 RBM5 PIH1D2 PIH1D2 RPSA RPSA SNIP1 SNIP1 LOC103253859 LOC103253859 SF3A1 SF3A1 LOC103251575 LOC103251575 SCAF11 SCAF11 NAF1 NAF1 ZNHIT3 ZNHIT3 GEMIN4 GEMIN4 NOP2 NOP2 ENSTSYP00000005597 ENSTSYP00000005597 NUFIP1 NUFIP1 STRAP STRAP CLP1 CLP1 ENSTSYP00000006242 ENSTSYP00000006242 LOC103251154 LOC103251154 SNU13 SNU13 PRMT7 PRMT7 BUD13 BUD13 AGO2 AGO2 ERAL1 ERAL1 CD2BP2 CD2BP2 SNRPD3 SNRPD3 SF3A3 SF3A3 EIF3D EIF3D CPSF6 CPSF6 LOC103254307 LOC103254307 PWP2 PWP2 LOC103249559 LOC103249559 SF3B4 SF3B4 LOC103271894 LOC103271894 SRSF10 SRSF10 RPL6 RPL6 RPLP0 RPLP0 CPSF7 CPSF7 SNRNP200 SNRNP200 GEMIN5 GEMIN5 RBMX2 RBMX2 LUC7L LUC7L MRPS11 MRPS11 SNRPD2 SNRPD2 SNRPC SNRPC ENSTSYP00000010811 ENSTSYP00000010811 AGO3 AGO3 NCBP1 NCBP1 SF3B5 SF3B5 ABT1 ABT1 ADAR ADAR MRTO4 MRTO4 RPF2 RPF2 SF3B6 SF3B6 XRCC5 XRCC5 AGO4 AGO4 PRPF8 PRPF8 XAB2 XAB2 SHQ1 SHQ1 NUDT21 NUDT21 FAU FAU ENSTSYP00000013778 ENSTSYP00000013778 ENSTSYP00000013827 ENSTSYP00000013827 SNRPG SNRPG DENR DENR ENSTSYP00000014427 ENSTSYP00000014427 ENSTSYP00000014666 ENSTSYP00000014666 EIF3K EIF3K ENSTSYP00000014776 ENSTSYP00000014776 ENSTSYP00000014827 ENSTSYP00000014827 ENSTSYP00000015083 ENSTSYP00000015083 ENSTSYP00000015197 ENSTSYP00000015197 EIF4B EIF4B RPS28 RPS28 SRPK3 SRPK3 ENSTSYP00000015492 ENSTSYP00000015492 ENSTSYP00000015578 ENSTSYP00000015578 ENSTSYP00000015617 ENSTSYP00000015617 TRAF7 TRAF7 ENSTSYP00000016096 ENSTSYP00000016096 ENSTSYP00000016132 ENSTSYP00000016132 ENSTSYP00000016183 ENSTSYP00000016183 ENSTSYP00000016203 ENSTSYP00000016203 ENSTSYP00000016263 ENSTSYP00000016263 LOC103268596 LOC103268596 SETX SETX ENSTSYP00000016426 ENSTSYP00000016426 ENSTSYP00000016436 ENSTSYP00000016436 ENSTSYP00000016538 ENSTSYP00000016538 ENSTSYP00000016662 ENSTSYP00000016662 ENSTSYP00000016750 ENSTSYP00000016750 DHX9 DHX9 YTHDC1 YTHDC1 ZNHIT6 ZNHIT6 CELF6 CELF6 CRNKL1 CRNKL1 PRPF39 PRPF39 ENSTSYP00000017493 ENSTSYP00000017493 NOL3 NOL3 TXNL4A TXNL4A ENSTSYP00000017573 ENSTSYP00000017573 ENSTSYP00000017629 ENSTSYP00000017629 RPS5 RPS5 SRSF1 SRSF1 DHX30 DHX30 SRSF6 SRSF6 EIF2D EIF2D USP4 USP4 ENSTSYP00000018220 ENSTSYP00000018220 POLR2D POLR2D ENSTSYP00000018544 ENSTSYP00000018544 ENSTSYP00000018630 ENSTSYP00000018630 SNRPD1 SNRPD1 EIF3G EIF3G ENSTSYP00000019030 ENSTSYP00000019030 LOC110595933 LOC110595933 ENSTSYP00000019178 ENSTSYP00000019178 ENSTSYP00000019264 ENSTSYP00000019264 LOC110596188 LOC110596188 ENSTSYP00000019386 ENSTSYP00000019386 ENSTSYP00000019418 ENSTSYP00000019418 ENSTSYP00000019951 ENSTSYP00000019951 ENSTSYP00000020100 ENSTSYP00000020100 CUNH12orf45 CUNH12orf45 CUNHXorf66 CUNHXorf66 ENSTSYP00000020728 ENSTSYP00000020728 PRPF3 PRPF3 ENSTSYP00000020831 ENSTSYP00000020831 EIF3E EIF3E ENSTSYP00000021130 ENSTSYP00000021130 ENSTSYP00000021498 ENSTSYP00000021498 ENSTSYP00000021724 ENSTSYP00000021724 ENSTSYP00000021999 ENSTSYP00000021999 ENSTSYP00000022194 ENSTSYP00000022194 SFSWAP SFSWAP LOC103268884 LOC103268884 PIH1D1 PIH1D1 ENSTSYP00000022813 ENSTSYP00000022813 PTBP2 PTBP2 PRMT5 PRMT5 LOC103264936 LOC103264936 RUVBL1 RUVBL1 ENSTSYP00000023166 ENSTSYP00000023166 SF3A2 SF3A2 LOC103270354 LOC103270354 EIF6 EIF6 USP39 USP39 ENSTSYP00000023805 ENSTSYP00000023805 MCTS2P MCTS2P EIF3I EIF3I ENSTSYP00000023981 ENSTSYP00000023981 ENSTSYP00000024021 ENSTSYP00000024021 ENSTSYP00000024162 ENSTSYP00000024162 EIF3J EIF3J ENSTSYP00000024443 ENSTSYP00000024443 RPS14 RPS14 ENSTSYP00000024697 ENSTSYP00000024697 LOC103263179 LOC103263179 ENSTSYP00000025105 ENSTSYP00000025105 ENSTSYP00000025106 ENSTSYP00000025106 ENSTSYP00000025173 ENSTSYP00000025173 FAM103A1 FAM103A1 ENSTSYP00000025255 ENSTSYP00000025255 ENSTSYP00000025350 ENSTSYP00000025350 CELF3 CELF3 TARBP2 TARBP2 ENSTSYP00000025493 ENSTSYP00000025493 ENSTSYP00000025620 ENSTSYP00000025620 WDR77 WDR77 EIF3B EIF3B LOC103272265 LOC103272265 ENSTSYP00000026344 ENSTSYP00000026344 LOC103265317 LOC103265317 ENSTSYP00000026935 ENSTSYP00000026935 ENSTSYP00000027035 ENSTSYP00000027035 PRPF31 PRPF31 SNRPE SNRPE ENSTSYP00000027389 ENSTSYP00000027389 LOC103271099 LOC103271099 NOP53 NOP53 BOP1 BOP1 SART1 SART1 LOC110595466 LOC110595466 RPL23A RPL23A ENSTSYP00000027926 ENSTSYP00000027926 SRSF5 SRSF5 ENSTSYP00000028128 ENSTSYP00000028128 SLU7 SLU7 CDC73 CDC73 LOC103255522 LOC103255522 LSM2 LSM2 EIF3A EIF3A KIAA0907 KIAA0907 LSM4 LSM4 DDX39B DDX39B ENSTSYP00000028859 ENSTSYP00000028859 ENSTSYP00000028921 ENSTSYP00000028921 AGO1 AGO1 ENSTSYP00000029255 ENSTSYP00000029255 ENSTSYP00000029577 ENSTSYP00000029577 GEMIN2 GEMIN2 SNRPG-2 SNRPG-2 GEMIN8 GEMIN8 ENSTSYP00000029895 ENSTSYP00000029895 PRPF19 PRPF19 ENSTSYP00000030197 ENSTSYP00000030197 LOC103264067 LOC103264067 ENSTSYP00000030846 ENSTSYP00000030846 MRM2 MRM2 PRKDC PRKDC CCDC94 CCDC94 LOC103274981 LOC103274981 ENSTSYP00000031641 ENSTSYP00000031641 MRPL20 MRPL20 CCDC105 CCDC105 ENSTSYP00000031977 ENSTSYP00000031977 SNRPB SNRPB ENSTSYP00000032064 ENSTSYP00000032064 LOC103249852 LOC103249852 ENSTSYP00000032300 ENSTSYP00000032300 ENSTSYP00000032453 ENSTSYP00000032453 RUVBL2 RUVBL2 MRPS7 MRPS7 LOC103261915 LOC103261915 ENSTSYP00000032785 ENSTSYP00000032785 ENSTSYP00000032860 ENSTSYP00000032860 ENSTSYP00000032911 ENSTSYP00000032911 ENSTSYP00000034091 ENSTSYP00000034091 ENSTSYP00000034219 ENSTSYP00000034219 ENSTSYP00000034264 ENSTSYP00000034264 ENSTSYP00000034290 ENSTSYP00000034290 PHF5A PHF5A ENSTSYP00000034382 ENSTSYP00000034382 ENSTSYP00000034428 ENSTSYP00000034428 ENSTSYP00000034478 ENSTSYP00000034478 SF3B1 SF3B1 ENSTSYP00000034566 ENSTSYP00000034566 ENSTSYP00000034628 ENSTSYP00000034628 SART3 SART3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPS1940S ribosomal protein S19 isoform X2. (145 aa)
LOC11059667140S ribosomal protein S27. (83 aa)
DDX20Probable ATP-dependent RNA helicase DDX20. (826 aa)
TGS1Trimethylguanosine synthase. (850 aa)
MDN1Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5595 aa)
EIF3MEukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (374 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
LUC7L3Luc7-like protein 3 isoform X1. (473 aa)
SRSF12Serine/arginine-rich splicing factor 12. (246 aa)
MCTS1Malignant T-cell-amplified sequence. (182 aa)
LOC103265646Eukaryotic translation initiation factor 3 subunit L; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (466 aa)
DICER1Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. (1845 aa)
RPL2460S ribosomal protein L24. (157 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (698 aa)
SRPK2SRSF protein kinase 2 isoform X1. (697 aa)
LOC103252085Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (913 aa)
FASTKD2FAST kinase domain-containing protein 2, mitochondrial. (702 aa)
ENSTSYP00000003210annotation not available (143 aa)
DHX29ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1365 aa)
CELF1CUGBP Elav-like family member 1. (512 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (366 aa)
RBM5LOW QUALITY PROTEIN: RNA-binding protein 5. (693 aa)
PIH1D2PIH1 domain-containing protein 2. (319 aa)
RPSA40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
SNIP1Smad nuclear-interacting protein 1. (396 aa)
LOC10325385960S ribosomal protein L38-like; Belongs to the eukaryotic ribosomal protein eL38 family. (49 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
LOC103251575U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2-like. (322 aa)
SCAF11Protein SCAF11. (1461 aa)
NAF1H/ACA ribonucleoprotein complex non-core subunit NAF1. (433 aa)
ZNHIT3Zinc finger HIT domain-containing protein 3 isoform X1. (155 aa)
GEMIN4Gem-associated protein 4. (1058 aa)
NOP2Probable 28S rRNA (Cytosine(4447)-C(5))-methyltransferase isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (838 aa)
ENSTSYP00000005597annotation not available (285 aa)
NUFIP1Nuclear fragile X mental retardation-interacting protein 1. (494 aa)
STRAPSerine-threonine kinase receptor-associated protein. (358 aa)
CLP1Polyribonucleotide 5'-hydroxyl-kinase Clp1; Polynucleotide kinase that can phosphorylate the 5'-hydroxyl groups of double-stranded RNA (dsRNA), single-stranded RNA (ssRNA), double stranded DNA (dsDNA) and double-stranded DNA:RNA hybrids. dsRNA is phosphorylated more efficiently than dsDNA, and the RNA component of a DNA:RNA hybrid is phosphorylated more efficiently than the DNA component. Appears to have roles in both tRNA splicing and mRNA 3'-end formation. Component of the tRNA splicing endonuclease complex. Phosphorylates the 5'-terminus of the tRNA 3'-exon during tRNA splicing; thi [...] (431 aa)
ENSTSYP00000006242annotation not available (43 aa)
LOC103251154Serine/arginine-rich splicing factor 9. (221 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
PRMT7Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (692 aa)
BUD13BUD13 homolog isoform X2. (635 aa)
AGO2Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] (876 aa)
ERAL1GTPase Era, mitochondrial isoform X1. (437 aa)
CD2BP2CD2 antigen cytoplasmic tail-binding protein 2. (341 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (470 aa)
EIF3DEukaryotic translation initiation factor 3 subunit D; mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl- tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required [...] (548 aa)
CPSF6Cleavage and polyadenylation specificity factor subunit 6 isoform X2. (588 aa)
LOC103254307U2 small nuclear ribonucleoprotein B'. (225 aa)
PWP2Periodic tryptophan protein 2 homolog. (915 aa)
LOC103249559PC4 and SFRS1-interacting protein. (526 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
LOC103271894Transcription initiation factor TFIID subunit 9-like. (263 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (266 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (288 aa)
RPLP060S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
CPSF7Cleavage and polyadenylation specificity factor subunit 7 isoform X1. (471 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2139 aa)
GEMIN5Gem-associated protein 5 isoform X1. (1515 aa)
RBMX2LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked 2. (327 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X1. (371 aa)
MRPS1128S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family. (193 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
ENSTSYP00000010811annotation not available (288 aa)
AGO3Protein argonaute-3; Belongs to the argonaute family. (724 aa)
NCBP1Nuclear cap-binding protein subunit 1. (423 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
ABT1Activator of basal transcription 1. (272 aa)
ADARDouble-stranded RNA-specific adenosine deaminase. (930 aa)
MRTO4Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (239 aa)
RPF2Ribosome production factor 2 homolog isoform X1. (306 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
XRCC5X-ray repair cross-complementing protein 5; Single-stranded DNA-dependent ATP-dependent helicase. Belongs to the ku80 family. (731 aa)
AGO4Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs. (855 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
XAB2pre-mRNA-splicing factor SYF1. (855 aa)
SHQ1Protein SHQ1 homolog isoform X1. (559 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
FAU40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
ENSTSYP00000013778annotation not available (114 aa)
ENSTSYP00000013827annotation not available (125 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (63 aa)
DENRDensity-regulated protein; Belongs to the DENR family. (198 aa)
ENSTSYP00000014427annotation not available (288 aa)
ENSTSYP00000014666annotation not available (410 aa)
EIF3KEukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (218 aa)
ENSTSYP00000014776annotation not available (198 aa)
ENSTSYP00000014827annotation not available (183 aa)
ENSTSYP00000015083annotation not available (188 aa)
ENSTSYP00000015197annotation not available (137 aa)
EIF4BEukaryotic translation initiation factor 4B isoform X2. (616 aa)
RPS2840S ribosomal protein S28. (69 aa)
SRPK3LOW QUALITY PROTEIN: SRSF protein kinase 3. (585 aa)
ENSTSYP00000015492annotation not available (129 aa)
ENSTSYP00000015578annotation not available (256 aa)
ENSTSYP00000015617annotation not available (295 aa)
TRAF7E3 ubiquitin-protein ligase TRAF7. (685 aa)
ENSTSYP00000016096annotation not available (115 aa)
ENSTSYP00000016132annotation not available (288 aa)
ENSTSYP00000016183annotation not available (97 aa)
ENSTSYP00000016203annotation not available (209 aa)
ENSTSYP00000016263annotation not available (216 aa)
LOC103268596Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (138 aa)
SETXProbable helicase senataxin. (849 aa)
ENSTSYP00000016426annotation not available (287 aa)
ENSTSYP00000016436annotation not available (89 aa)
ENSTSYP00000016538annotation not available (221 aa)
ENSTSYP00000016662annotation not available (101 aa)
ENSTSYP00000016750annotation not available (530 aa)
DHX9ATP-dependent RNA helicase A. (1272 aa)
YTHDC1YTH domain-containing protein 1 isoform X2. (727 aa)
ZNHIT6Box C/D snoRNA protein 1 isoform X1. (465 aa)
CELF6CUGBP Elav-like family member 6 isoform X1. (481 aa)
CRNKL1Crooked neck-like protein 1 isoform X1. (835 aa)
PRPF39pre-mRNA-processing factor 39 isoform X1. (668 aa)
ENSTSYP00000017493annotation not available (143 aa)
NOL3Nucleolar protein 3 isoform X2. (211 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ENSTSYP00000017573annotation not available (140 aa)
ENSTSYP00000017629annotation not available (287 aa)
RPS540S ribosomal protein S5 isoform X2; Belongs to the universal ribosomal protein uS7 family. (216 aa)
SRSF1Serine/arginine-rich splicing factor 1 isoform X1. (253 aa)
DHX30Putative ATP-dependent RNA helicase DHX30 isoform X1. (1222 aa)
SRSF6Serine/arginine-rich splicing factor 6. (294 aa)
EIF2DEukaryotic translation initiation factor 2D isoform X1. (585 aa)
USP4Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (965 aa)
ENSTSYP00000018220annotation not available (183 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (117 aa)
ENSTSYP00000018544annotation not available (150 aa)
ENSTSYP00000018630annotation not available (63 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
EIF3GEukaryotic translation initiation factor 3 subunit G. (303 aa)
ENSTSYP00000019030annotation not available (141 aa)
LOC11059593340S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Also acts as a receptor for several other ligands, including the pathogenic prion protein, viruses, and bacteri [...] (295 aa)
ENSTSYP00000019178annotation not available (309 aa)
ENSTSYP00000019264annotation not available (114 aa)
LOC110596188U2 small nuclear ribonucleoprotein B''-like. (201 aa)
ENSTSYP00000019386annotation not available (111 aa)
ENSTSYP00000019418annotation not available (63 aa)
ENSTSYP00000019951annotation not available (70 aa)
ENSTSYP00000020100annotation not available (197 aa)
CUNH12orf45Uncharacterized protein C12orf45 homolog. (184 aa)
CUNHXorf66Uncharacterized protein CXorf66 homolog. (355 aa)
ENSTSYP00000020728annotation not available (68 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
ENSTSYP00000020831annotation not available (266 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (445 aa)
ENSTSYP00000021130annotation not available (102 aa)
ENSTSYP00000021498annotation not available (242 aa)
ENSTSYP00000021724annotation not available (61 aa)
ENSTSYP00000021999annotation not available (101 aa)
ENSTSYP00000022194annotation not available (199 aa)
SFSWAPSplicing factor, suppressor of white-apricot homolog isoform X1. (998 aa)
LOC103268884pre-mRNA-splicing factor ISY1 homolog. (285 aa)
PIH1D1PIH1 domain-containing protein 1. (260 aa)
ENSTSYP00000022813annotation not available (247 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (534 aa)
PRMT5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (620 aa)
LOC103264936Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (365 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
ENSTSYP00000023166annotation not available (63 aa)
SF3A2Splicing factor 3A subunit 2. (183 aa)
LOC103270354Survival motor neuron protein. (287 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Behaves as a stimulatory translation initiation factor downstream insulin/growth factors. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export. Cytoplasmic release of TIF6 from 60S subunits and nuclear relocalization is promoted by a RACK1 (RACK1)- dependent protein kinase C activity. In tissues responsive to insulin, contro [...] (270 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2. (565 aa)
ENSTSYP00000023805annotation not available (94 aa)
MCTS2PMalignant T-cell-amplified sequence. (183 aa)
EIF3IEukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (325 aa)
ENSTSYP00000023981annotation not available (63 aa)
ENSTSYP00000024021annotation not available (211 aa)
ENSTSYP00000024162annotation not available (273 aa)
EIF3JEukaryotic translation initiation factor 3 subunit J; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (236 aa)
ENSTSYP00000024443annotation not available (323 aa)
RPS1440S ribosomal protein S14 isoform X2; Belongs to the universal ribosomal protein uS11 family. (158 aa)
ENSTSYP00000024697annotation not available (155 aa)
LOC103263179Uncharacterized protein LOC103263179. (119 aa)
ENSTSYP00000025105annotation not available (248 aa)
ENSTSYP00000025106annotation not available (198 aa)
ENSTSYP00000025173annotation not available (199 aa)
FAM103A1RNMT-activating mini protein. (118 aa)
ENSTSYP00000025255annotation not available (253 aa)
ENSTSYP00000025350annotation not available (295 aa)
CELF3CUGBP Elav-like family member 3. (447 aa)
TARBP2RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...] (366 aa)
ENSTSYP00000025493annotation not available (291 aa)
ENSTSYP00000025620annotation not available (128 aa)
WDR77Methylosome protein 50 isoform X2. (342 aa)
EIF3BEukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form [...] (727 aa)
LOC103272265Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF- 2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribos [...] (335 aa)
ENSTSYP00000026344annotation not available (146 aa)
LOC103265317PC4 and SFRS1-interacting protein-like isoform X2. (520 aa)
ENSTSYP00000026935annotation not available (280 aa)
ENSTSYP00000027035annotation not available (182 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (502 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ENSTSYP00000027389annotation not available (94 aa)
LOC103271099Methylosome subunit pICln-like isoform X1. (211 aa)
NOP53Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (439 aa)
BOP1Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (739 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (693 aa)
LOC11059546640S ribosomal protein S27-like. (107 aa)
RPL23A60S ribosomal protein L23a isoform X2; Belongs to the universal ribosomal protein uL23 family. (187 aa)
ENSTSYP00000027926annotation not available (186 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (274 aa)
ENSTSYP00000028128annotation not available (205 aa)
SLU7pre-mRNA-splicing factor SLU7. (586 aa)
CDC73Parafibromin. (531 aa)
LOC103255522LOW QUALITY PROTEIN: putative RNA-binding protein Luc7-like 2. (391 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
EIF3AEukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is required for several steps in the initiation of protein synthesis. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre- initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termi [...] (1362 aa)
KIAA0907UPF0469 protein KIAA0907 homolog. (614 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X2. (428 aa)
ENSTSYP00000028859annotation not available (212 aa)
ENSTSYP00000028921annotation not available (109 aa)
AGO1Protein argonaute-1; Belongs to the argonaute family. (857 aa)
ENSTSYP00000029255annotation not available (442 aa)
ENSTSYP00000029577annotation not available (95 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (280 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (77 aa)
GEMIN8Gem-associated protein 8. (239 aa)
ENSTSYP00000029895annotation not available (172 aa)
PRPF19pre-mRNA-processing factor 19. (505 aa)
ENSTSYP00000030197annotation not available (212 aa)
LOC103264067Methylosome subunit pICln isoform X1. (242 aa)
ENSTSYP00000030846annotation not available (122 aa)
MRM2rRNA methyltransferase 2, mitochondrial. (255 aa)
PRKDCDNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (3073 aa)
CCDC94Coiled-coil domain-containing protein 94. (322 aa)
LOC10327498160S ribosomal protein L5 isoform X1. (297 aa)
ENSTSYP00000031641annotation not available (172 aa)
MRPL2039S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
CCDC105Coiled-coil domain-containing protein 105. (539 aa)
ENSTSYP00000031977annotation not available (266 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (329 aa)
ENSTSYP00000032064annotation not available (147 aa)
LOC103249852Small nuclear ribonucleoprotein F-like. (83 aa)
ENSTSYP00000032300annotation not available (263 aa)
ENSTSYP00000032453annotation not available (118 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
MRPS728S ribosomal protein S7, mitochondrial. (242 aa)
LOC103261915Small nuclear ribonucleoprotein F. (85 aa)
ENSTSYP00000032785annotation not available (58 aa)
ENSTSYP00000032860annotation not available (147 aa)
ENSTSYP00000032911annotation not available (212 aa)
ENSTSYP00000034091annotation not available (61 aa)
ENSTSYP00000034219annotation not available (156 aa)
ENSTSYP00000034264annotation not available (742 aa)
ENSTSYP00000034290annotation not available (64 aa)
PHF5APHD finger-like domain-containing protein 5A isoform X1. (110 aa)
ENSTSYP00000034382annotation not available (151 aa)
ENSTSYP00000034428annotation not available (283 aa)
ENSTSYP00000034478annotation not available (240 aa)
SF3B1Splicing factor 3B subunit 1 isoform X2. (1306 aa)
ENSTSYP00000034566annotation not available (413 aa)
ENSTSYP00000034628annotation not available (244 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X2. (964 aa)
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
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