(16 nodes) pICln-Sm protein complex network (Carlito syrichta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSTSYP00000032785	annotation not available (58 aa)
	LOC103249852	Small nuclear ribonucleoprotein F-like. (83 aa)
	LOC103264067	Methylosome subunit pICln isoform X1. (242 aa)
	ENSTSYP00000030197	annotation not available (212 aa)
	LOC103271099	Methylosome subunit pICln-like isoform X1. (211 aa)
	SNRPE	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
	LOC103263179	Uncharacterized protein LOC103263179. (119 aa)
	ENSTSYP00000019264	annotation not available (114 aa)
	SNRPD1	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
	ENSTSYP00000018630	annotation not available (63 aa)
	ENSTSYP00000016436	annotation not available (89 aa)
	SNRPD2	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
	SNRPD3	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
	ENSTSYP00000006242	annotation not available (43 aa)
	ENSTSYP00000032911	annotation not available (212 aa)
	LOC103261915	Small nuclear ribonucleoprotein F. (85 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTSYP00000006242	ENSTSYP00000016436	ENSTSYP00000006242	ENSTSYP00000016436	annotation not available	annotation not available	0.968
ENSTSYP00000006242	ENSTSYP00000018630	ENSTSYP00000006242	ENSTSYP00000018630	annotation not available	annotation not available	0.968
ENSTSYP00000006242	ENSTSYP00000019264	ENSTSYP00000006242	ENSTSYP00000019264	annotation not available	annotation not available	0.992
ENSTSYP00000006242	ENSTSYP00000030197	ENSTSYP00000006242	ENSTSYP00000030197	annotation not available	annotation not available	0.779
ENSTSYP00000006242	ENSTSYP00000032785	ENSTSYP00000006242	ENSTSYP00000032785	annotation not available	annotation not available	0.968
ENSTSYP00000006242	ENSTSYP00000032911	ENSTSYP00000006242	ENSTSYP00000032911	annotation not available	annotation not available	0.779
ENSTSYP00000006242	LOC103264067	ENSTSYP00000006242	ENSTSYP00000030558	annotation not available	Methylosome subunit pICln isoform X1.	0.779
ENSTSYP00000006242	LOC103271099	ENSTSYP00000006242	ENSTSYP00000027440	annotation not available	Methylosome subunit pICln-like isoform X1.	0.779
ENSTSYP00000006242	SNRPD1	ENSTSYP00000006242	ENSTSYP00000018649	annotation not available	Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA.	0.997
ENSTSYP00000006242	SNRPD2	ENSTSYP00000006242	ENSTSYP00000010266	annotation not available	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.992
ENSTSYP00000006242	SNRPD3	ENSTSYP00000006242	ENSTSYP00000006959	annotation not available	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.996
ENSTSYP00000006242	SNRPE	ENSTSYP00000006242	ENSTSYP00000027292	annotation not available	Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development.	0.968
ENSTSYP00000016436	ENSTSYP00000006242	ENSTSYP00000016436	ENSTSYP00000006242	annotation not available	annotation not available	0.968
ENSTSYP00000016436	ENSTSYP00000019264	ENSTSYP00000016436	ENSTSYP00000019264	annotation not available	annotation not available	0.989
ENSTSYP00000016436	ENSTSYP00000030197	ENSTSYP00000016436	ENSTSYP00000030197	annotation not available	annotation not available	0.780
ENSTSYP00000016436	ENSTSYP00000032911	ENSTSYP00000016436	ENSTSYP00000032911	annotation not available	annotation not available	0.780
ENSTSYP00000016436	LOC103249852	ENSTSYP00000016436	ENSTSYP00000032210	annotation not available	Small nuclear ribonucleoprotein F-like.	0.968
ENSTSYP00000016436	LOC103261915	ENSTSYP00000016436	ENSTSYP00000032602	annotation not available	Small nuclear ribonucleoprotein F.	0.968
ENSTSYP00000016436	LOC103263179	ENSTSYP00000016436	ENSTSYP00000024832	annotation not available	Uncharacterized protein LOC103263179.	0.968
ENSTSYP00000016436	LOC103264067	ENSTSYP00000016436	ENSTSYP00000030558	annotation not available	Methylosome subunit pICln isoform X1.	0.780