(32 nodes) Proton-transporting ATP synthase complex network (Carlito syrichta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ATP5MF	ATP synthase subunit f, mitochondrial-like isoform X1. (98 aa)
	USMG5	Up-regulated during skeletal muscle growth protein 5. (58 aa)
	ATP5G3	ATP synthase F(0) complex subunit C3, mitochondrial isoform X1; Belongs to the ATPase C chain family. (141 aa)
	ENSTSYP00000002461	annotation not available (93 aa)
	ATP5MC2	ATP synthase F(0) complex subunit C2, mitochondrial; Belongs to the ATPase C chain family. (198 aa)
	DMAC2L	ATP synthase subunit s, mitochondrial isoform X1. (209 aa)
	CUNH14orf2	6.8 kDa mitochondrial proteolipid. (66 aa)
	ATP5A1	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (560 aa)
	ATP5O	ATP synthase subunit O, mitochondrial. (213 aa)
	ATP5B	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (529 aa)
	ATP5E	ATP synthase subunit epsilon, mitochondrial. (51 aa)
	ATP8	ATP synthase protein 8; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...] (67 aa)
	ATP6	ATP synthase subunit a. (226 aa)
	ENSTSYP00000013891	annotation not available (102 aa)
	ENSTSYP00000014176	annotation not available (562 aa)
	ATP5C1	ATP synthase subunit gamma. (298 aa)
	ENSTSYP00000016012	annotation not available (153 aa)
	ATP5H	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...] (152 aa)
	LOC103276196	ATP synthase subunit O, mitochondrial-like. (213 aa)
	LOC103251114	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. (505 aa)
	ENSTSYP00000024821	annotation not available (65 aa)
	ENSTSYP00000024943	annotation not available (139 aa)
	ATP5I	ATP synthase subunit e, mitochondrial. (69 aa)
	ATP5F1	ATP synthase F(0) complex subunit B1, mitochondrial. (254 aa)
	ENSTSYP00000027633	annotation not available (255 aa)
	ATP5L	ATP synthase subunit; Mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F1 - containing the extramembraneous catalytic core, and F0 - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proto [...] (103 aa)
	ATP5G1	ATP synthase F(0) complex subunit C1, mitochondrial; Belongs to the ATPase C chain family. (136 aa)
	ENSTSYP00000030513	annotation not available (149 aa)
	ENSTSYP00000031924	annotation not available (275 aa)
	ENSTSYP00000031980	annotation not available (240 aa)
	ATP5J	ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family. (116 aa)
	ENSTSYP00000033264	annotation not available (241 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5A1	ATP5B	ENSTSYP00000007147	ENSTSYP00000009143	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
ATP5A1	ATP5C1	ENSTSYP00000007147	ENSTSYP00000014664	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
ATP5A1	ATP5E	ENSTSYP00000007147	ENSTSYP00000011496	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit epsilon, mitochondrial.	0.995
ATP5A1	ATP5F1	ENSTSYP00000007147	ENSTSYP00000027611	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F(0) complex subunit B1, mitochondrial.	0.996
ATP5A1	ATP5G1	ENSTSYP00000007147	ENSTSYP00000028772	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F(0) complex subunit C1, mitochondrial; Belongs to the ATPase C chain family.	0.992
ATP5A1	ATP5G3	ENSTSYP00000007147	ENSTSYP00000001830	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F(0) complex subunit C3, mitochondrial isoform X1; Belongs to the ATPase C chain family.	0.996
ATP5A1	ATP5H	ENSTSYP00000007147	ENSTSYP00000016494	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit d, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the cent [...]	0.998
ATP5A1	ATP5I	ENSTSYP00000007147	ENSTSYP00000027218	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit e, mitochondrial.	0.992
ATP5A1	ATP5J	ENSTSYP00000007147	ENSTSYP00000032216	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase-coupling factor 6, mitochondrial; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain; Belongs to the eukaryotic ATPase subunit F6 family.	0.984
ATP5A1	ATP5L	ENSTSYP00000007147	ENSTSYP00000028302	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit; Mitochondrial membrane ATP synthase (F1F0 ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F1 - containing the extramembraneous catalytic core, and F0 - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F1 is coupled via a rotary mechanism of the central stalk subunits to proto [...]	0.981
ATP5A1	ATP5MC2	ENSTSYP00000007147	ENSTSYP00000003136	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase F(0) complex subunit C2, mitochondrial; Belongs to the ATPase C chain family.	0.990
ATP5A1	ATP5MF	ENSTSYP00000007147	ENSTSYP00000033406	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit f, mitochondrial-like isoform X1.	0.991
ATP5A1	ATP5O	ENSTSYP00000007147	ENSTSYP00000007850	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit O, mitochondrial.	0.997
ATP5A1	ATP6	ENSTSYP00000007147	ENSTSYP00000013701	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit a.	0.999
ATP5A1	ATP8	ENSTSYP00000007147	ENSTSYP00000013700	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase protein 8; Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subuni [...]	0.963
ATP5A1	CUNH14orf2	ENSTSYP00000007147	ENSTSYP00000005297	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	6.8 kDa mitochondrial proteolipid.	0.972
ATP5A1	DMAC2L	ENSTSYP00000007147	ENSTSYP00000003915	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit s, mitochondrial isoform X1.	0.703
ATP5A1	ENSTSYP00000002461	ENSTSYP00000007147	ENSTSYP00000002461	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	annotation not available	0.971
ATP5A1	ENSTSYP00000013891	ENSTSYP00000007147	ENSTSYP00000013891	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	annotation not available	0.977
ATP5A1	ENSTSYP00000016012	ENSTSYP00000007147	ENSTSYP00000016012	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	annotation not available	0.980