18 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TRAPPC3	Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi. (180 aa)
	SEC16B	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (1063 aa)
	TRAPPC11	Trafficking protein particle complex subunit 11. (876 aa)
	CUL3	Cullin-3; Belongs to the cullin family. (754 aa)
	TRAPPC12	Trafficking protein particle complex subunit 12. (707 aa)
	TRAPPC8	Trafficking protein particle complex subunit 8 isoform X2. (1432 aa)
	PDCD6	LOW QUALITY PROTEIN: programmed cell death protein 6. (121 aa)
	PREB	Prolactin regulatory element-binding protein. (373 aa)
	ENSTSYP00000021809	annotation not available (311 aa)
	TRAPPC1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	TRAPPC6A	Trafficking protein particle complex subunit 6A isoform X2. (159 aa)
	KLHL12	Kelch-like protein 12. (651 aa)
	PPP6C	Serine/threonine-protein phosphatase. (302 aa)
	ENSTSYP00000028029	annotation not available (442 aa)
	TRAPPC5	Trafficking protein particle complex subunit 5. (120 aa)
	PEF1	Peflin. (274 aa)
	SEC16A	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus. (2346 aa)
	TFG	Protein TFG isoform X1. (400 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	ENSTSYP00000021809	ENSTSYP00000006772	ENSTSYP00000021809	Cullin-3; Belongs to the cullin family.	annotation not available	0.401
CUL3	KLHL12	ENSTSYP00000006772	ENSTSYP00000027743	Cullin-3; Belongs to the cullin family.	Kelch-like protein 12.	0.962
CUL3	PDCD6	ENSTSYP00000006772	ENSTSYP00000016668	Cullin-3; Belongs to the cullin family.	LOW QUALITY PROTEIN: programmed cell death protein 6.	0.459
CUL3	PEF1	ENSTSYP00000006772	ENSTSYP00000033394	Cullin-3; Belongs to the cullin family.	Peflin.	0.459
CUL3	PPP6C	ENSTSYP00000006772	ENSTSYP00000027862	Cullin-3; Belongs to the cullin family.	Serine/threonine-protein phosphatase.	0.531
CUL3	TFG	ENSTSYP00000006772	ENSTSYP00000034111	Cullin-3; Belongs to the cullin family.	Protein TFG isoform X1.	0.401
ENSTSYP00000021809	CUL3	ENSTSYP00000021809	ENSTSYP00000006772	annotation not available	Cullin-3; Belongs to the cullin family.	0.401
ENSTSYP00000021809	ENSTSYP00000028029	ENSTSYP00000021809	ENSTSYP00000028029	annotation not available	annotation not available	0.401
ENSTSYP00000021809	PPP6C	ENSTSYP00000021809	ENSTSYP00000027862	annotation not available	Serine/threonine-protein phosphatase.	0.403
ENSTSYP00000021809	PREB	ENSTSYP00000021809	ENSTSYP00000019837	annotation not available	Prolactin regulatory element-binding protein.	0.588
ENSTSYP00000021809	SEC16A	ENSTSYP00000021809	ENSTSYP00000033746	annotation not available	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	0.789
ENSTSYP00000021809	SEC16B	ENSTSYP00000021809	ENSTSYP00000000335	annotation not available	Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.	0.789
ENSTSYP00000021809	TRAPPC6A	ENSTSYP00000021809	ENSTSYP00000027199	annotation not available	Trafficking protein particle complex subunit 6A isoform X2.	0.498
ENSTSYP00000028029	ENSTSYP00000021809	ENSTSYP00000028029	ENSTSYP00000021809	annotation not available	annotation not available	0.401
ENSTSYP00000028029	KLHL12	ENSTSYP00000028029	ENSTSYP00000027743	annotation not available	Kelch-like protein 12.	0.962
ENSTSYP00000028029	PDCD6	ENSTSYP00000028029	ENSTSYP00000016668	annotation not available	LOW QUALITY PROTEIN: programmed cell death protein 6.	0.459
ENSTSYP00000028029	PEF1	ENSTSYP00000028029	ENSTSYP00000033394	annotation not available	Peflin.	0.459
ENSTSYP00000028029	PPP6C	ENSTSYP00000028029	ENSTSYP00000027862	annotation not available	Serine/threonine-protein phosphatase.	0.531
ENSTSYP00000028029	TFG	ENSTSYP00000028029	ENSTSYP00000034111	annotation not available	Protein TFG isoform X1.	0.401
KLHL12	CUL3	ENSTSYP00000027743	ENSTSYP00000006772	Kelch-like protein 12.	Cullin-3; Belongs to the cullin family.	0.962