(15 nodes) Dendrite self-avoidance network (Carlito syrichta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DSCAML1	LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1. (1986 aa)
	NPTN	Neuroplastin isoform X1. (397 aa)
	MYPN	Myopalladin isoform X1. (1310 aa)
	CNTN2	Contactin-2. (1054 aa)
	CNTN6	Contactin-6 isoform X1. (1029 aa)
	DSCAM	Down syndrome cell adhesion molecule. (1832 aa)
	ROBO4	Roundabout homolog 4. (1006 aa)
	CNTN4	Contactin-4 isoform X1. (1009 aa)
	LOC103268289	Palladin. (577 aa)
	BSG	LOW QUALITY PROTEIN: basigin. (234 aa)
	IGSF9	Protein turtle homolog A. (1140 aa)
	EMB	Embigin. (169 aa)
	NEXN	Nexilin isoform X2. (675 aa)
	TNN	tenascin-N isoform X1. (1297 aa)
	VSTM2L	V-set and transmembrane domain containing 2 like. (164 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BSG	EMB	ENSTSYP00000023556	ENSTSYP00000029044	LOW QUALITY PROTEIN: basigin.	Embigin.	0.439
DSCAM	DSCAML1	ENSTSYP00000007834	ENSTSYP00000020641	Down syndrome cell adhesion molecule.	LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1.	0.731
DSCAM	ROBO4	ENSTSYP00000007834	ENSTSYP00000006100	Down syndrome cell adhesion molecule.	Roundabout homolog 4.	0.420
DSCAML1	DSCAM	ENSTSYP00000020641	ENSTSYP00000007834	LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1.	Down syndrome cell adhesion molecule.	0.731
DSCAML1	ROBO4	ENSTSYP00000020641	ENSTSYP00000006100	LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1.	Roundabout homolog 4.	0.420
EMB	BSG	ENSTSYP00000029044	ENSTSYP00000023556	Embigin.	LOW QUALITY PROTEIN: basigin.	0.439
LOC103268289	MYPN	ENSTSYP00000001893	ENSTSYP00000011177	Palladin.	Myopalladin isoform X1.	0.523
LOC103268289	TNN	ENSTSYP00000001893	ENSTSYP00000001276	Palladin.	tenascin-N isoform X1.	0.524
MYPN	LOC103268289	ENSTSYP00000011177	ENSTSYP00000001893	Myopalladin isoform X1.	Palladin.	0.523
MYPN	TNN	ENSTSYP00000011177	ENSTSYP00000001276	Myopalladin isoform X1.	tenascin-N isoform X1.	0.524
ROBO4	DSCAM	ENSTSYP00000006100	ENSTSYP00000007834	Roundabout homolog 4.	Down syndrome cell adhesion molecule.	0.420
ROBO4	DSCAML1	ENSTSYP00000006100	ENSTSYP00000020641	Roundabout homolog 4.	LOW QUALITY PROTEIN: Down syndrome cell adhesion molecule-like protein 1.	0.420
TNN	LOC103268289	ENSTSYP00000001276	ENSTSYP00000001893	tenascin-N isoform X1.	Palladin.	0.524
TNN	MYPN	ENSTSYP00000001276	ENSTSYP00000011177	tenascin-N isoform X1.	Myopalladin isoform X1.	0.524