STRINGSTRING
LOC103261915 LOC103261915 ENSTSYP00000032785 ENSTSYP00000032785 EFTUD2 EFTUD2 ENSTSYP00000033279 ENSTSYP00000033279 ENSTSYP00000033720 ENSTSYP00000033720 ENSTSYP00000034219 ENSTSYP00000034219 PHF5A PHF5A ENSTSYP00000034334 ENSTSYP00000034334 ENSTSYP00000034478 ENSTSYP00000034478 SF3B1 SF3B1 RBM42 RBM42 SF3A3 SF3A3 LOC103254307 LOC103254307 SF3B4 SF3B4 SNRNP40 SNRNP40 PRPF4 PRPF4 SNRNP200 SNRNP200 RBMX2 RBMX2 LUC7L LUC7L SNRPD2 SNRPD2 SNRPC SNRPC SF3B5 SF3B5 PRPF40A PRPF40A ENSTSYP00000011700 ENSTSYP00000011700 PRPF40B PRPF40B SF3B6 SF3B6 PRPF8 PRPF8 ENSTSYP00000013778 ENSTSYP00000013778 SNRPG SNRPG ENSTSYP00000014527 ENSTSYP00000014527 ENSTSYP00000014827 ENSTSYP00000014827 ENSTSYP00000015083 ENSTSYP00000015083 LSM8 LSM8 ENSTSYP00000016436 ENSTSYP00000016436 ENSTSYP00000017201 ENSTSYP00000017201 PPIH PPIH PRPF39 PRPF39 TXNL4A TXNL4A ENSTSYP00000017573 ENSTSYP00000017573 ENSTSYP00000018220 ENSTSYP00000018220 SNRPD3 SNRPD3 CUNH19orf54 CUNH19orf54 CD2BP2 CD2BP2 BUD13 BUD13 SNU13 SNU13 ENSTSYP00000006242 ENSTSYP00000006242 DDX23 DDX23 LSM3 LSM3 SF3A1 SF3A1 SNIP1 SNIP1 LUC7L3 LUC7L3 SF3B2 SF3B2 ENSTSYP00000018630 ENSTSYP00000018630 SNRPD1 SNRPD1 SNRPA SNRPA ENSTSYP00000019264 ENSTSYP00000019264 LOC110596188 LOC110596188 TXNL4B TXNL4B ENSTSYP00000020100 ENSTSYP00000020100 ENSTSYP00000020728 ENSTSYP00000020728 PRPF3 PRPF3 ENSTSYP00000021130 ENSTSYP00000021130 SNRNP27 SNRNP27 LSM5 LSM5 ENSTSYP00000023166 ENSTSYP00000023166 SF3A2 SF3A2 ZMAT2 ZMAT2 USP39 USP39 ENSTSYP00000023805 ENSTSYP00000023805 LOC103263179 LOC103263179 ENSTSYP00000025173 ENSTSYP00000025173 ENSTSYP00000026344 ENSTSYP00000026344 ENSTSYP00000027035 ENSTSYP00000027035 SNRPB SNRPB LSM6 LSM6 ENSTSYP00000030270 ENSTSYP00000030270 SNRPG-2 SNRPG-2 ENSTSYP00000027759 ENSTSYP00000027759 ENSTSYP00000029255 ENSTSYP00000029255 DDX39B DDX39B LSM4 LSM4 LSM2 LSM2 LOC103255522 LOC103255522 LSM7 LSM7 ENSTSYP00000028128 ENSTSYP00000028128 SART1 SART1 PRPF31 PRPF31 SNRPE SNRPE LOC103249566 LOC103249566 LOC103249852 LOC103249852
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC103261915Small nuclear ribonucleoprotein F. (85 aa)
ENSTSYP00000032785annotation not available (58 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
ENSTSYP00000033279annotation not available (198 aa)
ENSTSYP00000033720annotation not available (85 aa)
ENSTSYP00000034219annotation not available (156 aa)
PHF5APHD finger-like domain-containing protein 5A isoform X1. (110 aa)
ENSTSYP00000034334annotation not available (85 aa)
ENSTSYP00000034478annotation not available (240 aa)
SF3B1Splicing factor 3B subunit 1 isoform X2. (1306 aa)
RBM42RNA-binding protein 42 isoform X1. (478 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (470 aa)
LOC103254307U2 small nuclear ribonucleoprotein B'. (225 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein isoform X1. (358 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2. (536 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2139 aa)
RBMX2LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked 2. (327 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X1. (371 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (121 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (159 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
PRPF40ALOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A. (929 aa)
ENSTSYP00000011700annotation not available (76 aa)
PRPF40Bpre-mRNA-processing factor 40 homolog B isoform X2. (894 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
ENSTSYP00000013778annotation not available (114 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (63 aa)
ENSTSYP00000014527annotation not available (173 aa)
ENSTSYP00000014827annotation not available (183 aa)
ENSTSYP00000015083annotation not available (188 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
ENSTSYP00000016436annotation not available (89 aa)
ENSTSYP00000017201annotation not available (73 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
PRPF39pre-mRNA-processing factor 39 isoform X1. (668 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
ENSTSYP00000017573annotation not available (140 aa)
ENSTSYP00000018220annotation not available (183 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
CUNH19orf54UPF0692 protein C19orf54 homolog. (348 aa)
CD2BP2CD2 antigen cytoplasmic tail-binding protein 2. (341 aa)
BUD13BUD13 homolog isoform X2. (635 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
ENSTSYP00000006242annotation not available (43 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNIP1Smad nuclear-interacting protein 1. (396 aa)
LUC7L3Luc7-like protein 3 isoform X1. (473 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (895 aa)
ENSTSYP00000018630annotation not available (63 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SNRPAU1 small nuclear ribonucleoprotein A isoform X1. (282 aa)
ENSTSYP00000019264annotation not available (114 aa)
LOC110596188U2 small nuclear ribonucleoprotein B''-like. (201 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
ENSTSYP00000020100annotation not available (197 aa)
ENSTSYP00000020728annotation not available (68 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
ENSTSYP00000021130annotation not available (102 aa)
SNRNP27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein isoform X1. (155 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
ENSTSYP00000023166annotation not available (63 aa)
SF3A2Splicing factor 3A subunit 2. (183 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2. (565 aa)
ENSTSYP00000023805annotation not available (94 aa)
LOC103263179Uncharacterized protein LOC103263179. (119 aa)
ENSTSYP00000025173annotation not available (199 aa)
ENSTSYP00000026344annotation not available (146 aa)
ENSTSYP00000027035annotation not available (182 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (329 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6 isoform X2. (80 aa)
ENSTSYP00000030270annotation not available (92 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (77 aa)
ENSTSYP00000027759annotation not available (152 aa)
ENSTSYP00000029255annotation not available (442 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X2. (428 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
LOC103255522LOW QUALITY PROTEIN: putative RNA-binding protein Luc7-like 2. (391 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (49 aa)
ENSTSYP00000028128annotation not available (205 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1. (693 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31. (502 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
LOC103249566U1 small nuclear ribonucleoprotein 70 kDa isoform X3. (124 aa)
LOC103249852Small nuclear ribonucleoprotein F-like. (83 aa)
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
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