17 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMB3	Proteasome subunit beta. (207 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	ENSTSYP00000009770	annotation not available (227 aa)
	ENSTSYP00000034042	annotation not available (110 aa)
	ENSTSYP00000032718	annotation not available (175 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	ENSTSYP00000028770	annotation not available (118 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	ENSTSYP00000025727	annotation not available (215 aa)
	ENSTSYP00000021540	annotation not available (291 aa)
	PSMB6	Proteasome subunit beta. (242 aa)
	LOC103276105	Protein AF-17. (310 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTSYP00000009770	ENSTSYP00000021540	ENSTSYP00000009770	ENSTSYP00000021540	annotation not available	annotation not available	0.992
ENSTSYP00000009770	ENSTSYP00000028770	ENSTSYP00000009770	ENSTSYP00000028770	annotation not available	annotation not available	0.984
ENSTSYP00000009770	ENSTSYP00000032718	ENSTSYP00000009770	ENSTSYP00000032718	annotation not available	annotation not available	0.984
ENSTSYP00000009770	ENSTSYP00000034042	ENSTSYP00000009770	ENSTSYP00000034042	annotation not available	annotation not available	0.984
ENSTSYP00000009770	PSMB1	ENSTSYP00000009770	ENSTSYP00000001400	annotation not available	Proteasome subunit beta.	0.996
ENSTSYP00000009770	PSMB10	ENSTSYP00000009770	ENSTSYP00000026504	annotation not available	Proteasome subunit beta.	0.991
ENSTSYP00000009770	PSMB2	ENSTSYP00000009770	ENSTSYP00000005163	annotation not available	Proteasome subunit beta.	0.997
ENSTSYP00000009770	PSMB3	ENSTSYP00000009770	ENSTSYP00000011895	annotation not available	Proteasome subunit beta.	0.984
ENSTSYP00000009770	PSMB4	ENSTSYP00000009770	ENSTSYP00000007284	annotation not available	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.997
ENSTSYP00000009770	PSMB5	ENSTSYP00000009770	ENSTSYP00000031830	annotation not available	Proteasome subunit beta.	0.992
ENSTSYP00000009770	PSMB7	ENSTSYP00000009770	ENSTSYP00000011139	annotation not available	Proteasome subunit beta.	0.996
ENSTSYP00000009770	PSMB8	ENSTSYP00000009770	ENSTSYP00000030820	annotation not available	Proteasome subunit beta.	0.993
ENSTSYP00000009770	PSMB9	ENSTSYP00000009770	ENSTSYP00000007101	annotation not available	Proteasome subunit beta.	0.892
ENSTSYP00000021540	ENSTSYP00000009770	ENSTSYP00000021540	ENSTSYP00000009770	annotation not available	annotation not available	0.992
ENSTSYP00000021540	ENSTSYP00000025727	ENSTSYP00000021540	ENSTSYP00000025727	annotation not available	annotation not available	0.993
ENSTSYP00000021540	ENSTSYP00000028770	ENSTSYP00000021540	ENSTSYP00000028770	annotation not available	annotation not available	0.982
ENSTSYP00000021540	ENSTSYP00000032718	ENSTSYP00000021540	ENSTSYP00000032718	annotation not available	annotation not available	0.982
ENSTSYP00000021540	ENSTSYP00000034042	ENSTSYP00000021540	ENSTSYP00000034042	annotation not available	annotation not available	0.982
ENSTSYP00000021540	PSMB1	ENSTSYP00000021540	ENSTSYP00000001400	annotation not available	Proteasome subunit beta.	0.997
ENSTSYP00000021540	PSMB10	ENSTSYP00000021540	ENSTSYP00000026504	annotation not available	Proteasome subunit beta.	0.993