(27 nodes) Longin-like domain superfamily network (Carlito syrichta)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	SEC22C	Vesicle-trafficking protein SEC22c isoform X1; Belongs to the synaptobrevin family. (303 aa)
	AP3S2	AP-3 complex subunit sigma-2 isoform X2. (199 aa)
	ARCN1	Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (537 aa)
	AP1S2	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (160 aa)
	AP3M2	AP-3 complex subunit mu-2 isoform X1; Belongs to the adaptor complexes medium subunit family. (418 aa)
	AP1S3	AP-1 complex subunit sigma-3. (154 aa)
	TRAPPC2	Trafficking protein particle complex subunit 2. (170 aa)
	AP1S1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (159 aa)
	AP3M1	AP-3 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family. (418 aa)
	COPZ1	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (184 aa)
	AP1M1	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family. (436 aa)
	AP4S1	AP-4 complex subunit sigma-1 isoform X2. (163 aa)
	AP4M1	AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (402 aa)
	AP2S1	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (159 aa)
	AP1M2	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family. (409 aa)
	SRPRA	LOW QUALITY PROTEIN: signal recognition particle receptor subunit alpha. (533 aa)
	TRAPPC1	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (145 aa)
	VAMP7	Vesicle-associated membrane protein 7 isoform X1; Belongs to the synaptobrevin family. (220 aa)
	COPZ2	Coatomer subunit zeta; The zeta subunit may be involved in regulating the coat assembly and, hence, the rate of biosynthetic protein transport due to its association-dissociation properties with the coatomer complex. (144 aa)
	TRAPPC4	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (220 aa)
	TRAPPC2L	Trafficking protein particle complex subunit 2-like protein isoform X2. (149 aa)
	SEC22A	Vesicle-trafficking protein SEC22a; Belongs to the synaptobrevin family. (307 aa)
	AP3S1	AP-3 complex subunit sigma-1 isoform X8. (155 aa)
	AP3S1-2	AP-3 complex subunit sigma-1 isoform X1. (193 aa)
	AP2M1	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family. (452 aa)
	SEC22B	Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family. (215 aa)
	YKT6	Synaptobrevin homolog YKT6 isoform X3; Belongs to the synaptobrevin family. (198 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AP1M1	AP1S1	ENSTSYP00000017771	ENSTSYP00000014701	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.992
AP1M1	AP1S2	ENSTSYP00000017771	ENSTSYP00000004843	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.983
AP1M1	AP1S3	ENSTSYP00000017771	ENSTSYP00000007986	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit sigma-3.	0.988
AP1M1	AP2M1	ENSTSYP00000017771	ENSTSYP00000033756	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	0.738
AP1M1	AP2S1	ENSTSYP00000017771	ENSTSYP00000022270	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.665
AP1M1	AP3M1	ENSTSYP00000017771	ENSTSYP00000017522	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	0.455
AP1M1	AP3M2	ENSTSYP00000017771	ENSTSYP00000005457	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit mu-2 isoform X1; Belongs to the adaptor complexes medium subunit family.	0.448
AP1M1	AP3S1	ENSTSYP00000017771	ENSTSYP00000030939	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit sigma-1 isoform X8.	0.541
AP1M1	AP3S1-2	ENSTSYP00000017771	ENSTSYP00000033168	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit sigma-1 isoform X1.	0.693
AP1M1	AP3S2	ENSTSYP00000017771	ENSTSYP00000002318	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit sigma-2 isoform X2.	0.693
AP1M1	AP4S1	ENSTSYP00000017771	ENSTSYP00000019170	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	AP-4 complex subunit sigma-1 isoform X2.	0.958
AP1M1	VAMP7	ENSTSYP00000017771	ENSTSYP00000023496	AP-1 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	Vesicle-associated membrane protein 7 isoform X1; Belongs to the synaptobrevin family.	0.635
AP1M2	AP1S1	ENSTSYP00000022647	ENSTSYP00000014701	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.992
AP1M2	AP1S2	ENSTSYP00000022647	ENSTSYP00000004843	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.983
AP1M2	AP1S3	ENSTSYP00000022647	ENSTSYP00000007986	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP-1 complex subunit sigma-3.	0.988
AP1M2	AP2M1	ENSTSYP00000022647	ENSTSYP00000033756	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP-2 complex subunit mu isoform X1; Belongs to the adaptor complexes medium subunit family.	0.738
AP1M2	AP2S1	ENSTSYP00000022647	ENSTSYP00000022270	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.	0.665
AP1M2	AP3M1	ENSTSYP00000022647	ENSTSYP00000017522	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family.	0.455
AP1M2	AP3M2	ENSTSYP00000022647	ENSTSYP00000005457	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit mu-2 isoform X1; Belongs to the adaptor complexes medium subunit family.	0.448
AP1M2	AP3S1	ENSTSYP00000022647	ENSTSYP00000030939	AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family.	AP-3 complex subunit sigma-1 isoform X8.	0.541