12 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PARK7	Protein DJ-1. (189 aa)
	CAD	CAD protein. (2211 aa)
	TCAF2	TRPM8 channel-associated factor 2 isoform X1. (753 aa)
	CPS1	Carbamoyl-phosphate synthase [ammonia], mitochondrial. (1506 aa)
	TCAF1	TRPM8 channel-associated factor 1 isoform X1. (920 aa)
	GGH	Folate gamma-glutamyl hydrolase. (303 aa)
	CTPS1	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (591 aa)
	CUNH21orf33	ES1 protein homolog, mitochondrial isoform X1. (268 aa)
	PFAS	Phosphoribosylformylglycinamidine synthase. (1343 aa)
	GMPS	GMP synthase [glutamine-hydrolyzing]. (705 aa)
	CTPS2	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. (483 aa)
	GATD1	Parkinson disease 7 domain-containing protein 1 isoform X1. (198 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAD	CPS1	ENSTSYP00000023247	ENSTSYP00000004837	CAD protein.	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	0.832
CAD	CTPS1	ENSTSYP00000023247	ENSTSYP00000005846	CAD protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.780
CAD	CTPS2	ENSTSYP00000023247	ENSTSYP00000012448	CAD protein.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.745
CAD	GMPS	ENSTSYP00000023247	ENSTSYP00000008684	CAD protein.	GMP synthase [glutamine-hydrolyzing].	0.687
CAD	PFAS	ENSTSYP00000023247	ENSTSYP00000006987	CAD protein.	Phosphoribosylformylglycinamidine synthase.	0.526
CPS1	CAD	ENSTSYP00000004837	ENSTSYP00000023247	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	CAD protein.	0.832
CPS1	CTPS1	ENSTSYP00000004837	ENSTSYP00000005846	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.745
CPS1	CTPS2	ENSTSYP00000004837	ENSTSYP00000012448	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.745
CPS1	GMPS	ENSTSYP00000004837	ENSTSYP00000008684	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	GMP synthase [glutamine-hydrolyzing].	0.687
CTPS1	CAD	ENSTSYP00000005846	ENSTSYP00000023247	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	CAD protein.	0.780
CTPS1	CPS1	ENSTSYP00000005846	ENSTSYP00000004837	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	0.745
CTPS1	CTPS2	ENSTSYP00000005846	ENSTSYP00000012448	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.975
CTPS1	GMPS	ENSTSYP00000005846	ENSTSYP00000008684	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	GMP synthase [glutamine-hydrolyzing].	0.970
CTPS1	PFAS	ENSTSYP00000005846	ENSTSYP00000006987	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Phosphoribosylformylglycinamidine synthase.	0.572
CTPS2	CAD	ENSTSYP00000012448	ENSTSYP00000023247	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	CAD protein.	0.745
CTPS2	CPS1	ENSTSYP00000012448	ENSTSYP00000004837	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	Carbamoyl-phosphate synthase [ammonia], mitochondrial.	0.745
CTPS2	CTPS1	ENSTSYP00000012448	ENSTSYP00000005846	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	0.975
CTPS2	GMPS	ENSTSYP00000012448	ENSTSYP00000008684	CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.	GMP synthase [glutamine-hydrolyzing].	0.967
CUNH21orf33	PARK7	ENSTSYP00000031621	ENSTSYP00000015661	ES1 protein homolog, mitochondrial isoform X1.	Protein DJ-1.	0.523
GATD1	PARK7	ENSTSYP00000020927	ENSTSYP00000015661	Parkinson disease 7 domain-containing protein 1 isoform X1.	Protein DJ-1.	0.426