84 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UBA3	NEDD8-activating enzyme E1 catalytic subunit. (462 aa)
	ENSTSYP00000000614	annotation not available (191 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	RPS27A	ubiquitin-40S ribosomal protein S27a. (156 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMA1	Proteasome subunit alpha type. (264 aa)
	PSMD2	26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. (908 aa)
	CHUK	Inhibitor of nuclear factor kappa-B kinase subunit alpha. (744 aa)
	PSMD14	26S proteasome non-ATPase regulatory subunit 14. (326 aa)
	RELB	Transcription factor RelB. (510 aa)
	PSMA4	Proteasome subunit alpha type. (179 aa)
	PSMF1	Proteasome inhibitor PI31 subunit isoform X2. (272 aa)
	PSME1	Proteasome activator complex subunit 1 isoform X1. (250 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMC1	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (440 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	LOC103272535	26S proteasome non-ATPase regulatory subunit 7. (324 aa)
	MAP3K14	Mitogen-activated protein kinase kinase kinase 14. (937 aa)
	PSMC6	26S protease regulatory subunit 10B; Belongs to the AAA ATPase family. (403 aa)
	ENSTSYP00000009770	annotation not available (227 aa)
	SKP1	S-phase kinase-associated protein 1 isoform X2; Belongs to the SKP1 family. (163 aa)
	UBE2M	NEDD8-conjugating enzyme Ubc12; Belongs to the ubiquitin-conjugating enzyme family. (172 aa)
	PSMD5	26S proteasome non-ATPase regulatory subunit 5 isoform X1. (513 aa)
	PSMA7	Proteasome endopeptidase complex. (248 aa)
	PSMD13	26S proteasome non-ATPase regulatory subunit 13 isoform X1. (396 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	ENSTSYP00000027147	annotation not available (149 aa)
	ENSTSYP00000027311	annotation not available (388 aa)
	PSMC5	26S protease regulatory subunit 8 isoform X2; Belongs to the AAA ATPase family. (398 aa)
	ENSTSYP00000028373	annotation not available (134 aa)
	ENSTSYP00000028450	annotation not available (227 aa)
	ENSTSYP00000028770	annotation not available (118 aa)
	LOC103250392	26S protease regulatory subunit 7; Belongs to the AAA ATPase family. (400 aa)
	ENSTSYP00000030504	annotation not available (156 aa)
	ENSTSYP00000030676	annotation not available (108 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	LOC103262238	Proteasome subunit alpha type. (261 aa)
	ENSTSYP00000031721	annotation not available (275 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	ENSTSYP00000032262	annotation not available (99 aa)
	PSME2	Proteasome activator complex subunit 2 isoform X1. (254 aa)
	ENSTSYP00000032718	annotation not available (175 aa)
	PSMC4	26S protease regulatory subunit 6B isoform X1; Belongs to the AAA ATPase family. (418 aa)
	ENSTSYP00000033058	annotation not available (142 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	LOC110596262	ubiquitin-40S ribosomal protein S27a-like. (156 aa)
	ENSTSYP00000034042	annotation not available (110 aa)
	PSMD8	26S proteasome non-ATPase regulatory subunit 8. (264 aa)
	PSMD6	26S proteasome non-ATPase regulatory subunit 6 isoform X1. (416 aa)
	PSME4	Proteasome activator complex subunit 4 isoform X2. (1825 aa)
	PSMD11	26S proteasome non-ATPase regulatory subunit 11. (422 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMD3	26S proteasome non-ATPase regulatory subunit 3 isoform X2. (534 aa)
	PSMB3	Proteasome subunit beta. (207 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S1 family. (623 aa)
	PSMD12	26S proteasome non-ATPase regulatory subunit 12. (420 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	ENSTSYP00000014559	annotation not available (115 aa)
	ENSTSYP00000015668	annotation not available (251 aa)
	PSMC3	26S protease regulatory subunit 6A; Belongs to the AAA ATPase family. (450 aa)
	CUL1	Cullin-1 isoform X1; Belongs to the cullin family. (776 aa)
	FBXW11	F-box/WD repeat-containing protein 11 isoform X1. (533 aa)
	ENSTSYP00000017997	annotation not available (123 aa)
	ENSTSYP00000019039	annotation not available (232 aa)
	ENSTSYP00000019245	annotation not available (285 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10 isoform X1. (226 aa)
	PSMB6	Proteasome subunit beta. (242 aa)
	ENSTSYP00000021013	annotation not available (135 aa)
	PSME3	Proteasome activator complex subunit 3 isoform X1. (265 aa)
	ENSTSYP00000021540	annotation not available (291 aa)
	BTRC	F-box/WD repeat-containing protein 1A isoform X1. (589 aa)
	ENSTSYP00000022222	annotation not available (155 aa)
	ENSTSYP00000023689	annotation not available (139 aa)
	UBA52	ubiquitin-60S ribosomal protein L40 isoform X1. (231 aa)
	RELA	Transcription factor p65. (519 aa)
	ENSTSYP00000024485	annotation not available (234 aa)
	ENSTSYP00000024947	annotation not available (143 aa)
	ENSTSYP00000025346	annotation not available (194 aa)
	PSMD4	26S proteasome non-ATPase regulatory subunit 4 isoform X2. (377 aa)
	PSMD9	26S proteasome non-ATPase regulatory subunit 9 isoform X1. (220 aa)
	ENSTSYP00000025727	annotation not available (215 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BTRC	CHUK	ENSTSYP00000022052	ENSTSYP00000004117	F-box/WD repeat-containing protein 1A isoform X1.	Inhibitor of nuclear factor kappa-B kinase subunit alpha.	0.688
BTRC	CUL1	ENSTSYP00000022052	ENSTSYP00000016060	F-box/WD repeat-containing protein 1A isoform X1.	Cullin-1 isoform X1; Belongs to the cullin family.	0.999
BTRC	ENSTSYP00000014559	ENSTSYP00000022052	ENSTSYP00000014559	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.848
BTRC	ENSTSYP00000017997	ENSTSYP00000022052	ENSTSYP00000017997	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.810
BTRC	ENSTSYP00000019245	ENSTSYP00000022052	ENSTSYP00000019245	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.531
BTRC	ENSTSYP00000021013	ENSTSYP00000022052	ENSTSYP00000021013	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.965
BTRC	ENSTSYP00000022222	ENSTSYP00000022052	ENSTSYP00000022222	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.826
BTRC	ENSTSYP00000023689	ENSTSYP00000022052	ENSTSYP00000023689	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.965
BTRC	ENSTSYP00000024947	ENSTSYP00000022052	ENSTSYP00000024947	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.965
BTRC	ENSTSYP00000027147	ENSTSYP00000022052	ENSTSYP00000027147	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.811
BTRC	ENSTSYP00000030504	ENSTSYP00000022052	ENSTSYP00000030504	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.965
BTRC	ENSTSYP00000030676	ENSTSYP00000022052	ENSTSYP00000030676	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.810
BTRC	ENSTSYP00000033058	ENSTSYP00000022052	ENSTSYP00000033058	F-box/WD repeat-containing protein 1A isoform X1.	annotation not available	0.965
BTRC	FBXW11	ENSTSYP00000022052	ENSTSYP00000016571	F-box/WD repeat-containing protein 1A isoform X1.	F-box/WD repeat-containing protein 11 isoform X1.	0.982
BTRC	LOC103272535	ENSTSYP00000022052	ENSTSYP00000007638	F-box/WD repeat-containing protein 1A isoform X1.	26S proteasome non-ATPase regulatory subunit 7.	0.531
BTRC	LOC110596262	ENSTSYP00000022052	ENSTSYP00000033403	F-box/WD repeat-containing protein 1A isoform X1.	ubiquitin-40S ribosomal protein S27a-like.	0.826
BTRC	MAP3K14	ENSTSYP00000022052	ENSTSYP00000008184	F-box/WD repeat-containing protein 1A isoform X1.	Mitogen-activated protein kinase kinase kinase 14.	0.611
BTRC	PSMC1	ENSTSYP00000022052	ENSTSYP00000007275	F-box/WD repeat-containing protein 1A isoform X1.	26S protease regulatory subunit 4; Belongs to the AAA ATPase family.	0.425
BTRC	PSMD14	ENSTSYP00000022052	ENSTSYP00000004327	F-box/WD repeat-containing protein 1A isoform X1.	26S proteasome non-ATPase regulatory subunit 14.	0.574
BTRC	PSMD4	ENSTSYP00000022052	ENSTSYP00000025459	F-box/WD repeat-containing protein 1A isoform X1.	26S proteasome non-ATPase regulatory subunit 4 isoform X2.	0.563