29 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSTSYP00000025727	annotation not available (215 aa)
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMB1	Proteasome subunit beta. (241 aa)
	PSMA1	Proteasome subunit alpha type. (264 aa)
	PSMA4	Proteasome subunit alpha type. (179 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMB9	Proteasome subunit beta. (219 aa)
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	ENSTSYP00000009770	annotation not available (227 aa)
	PSMA7	Proteasome endopeptidase complex. (248 aa)
	PSMB7	Proteasome subunit beta. (277 aa)
	PSMB3	Proteasome subunit beta. (207 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	ENSTSYP00000015668	annotation not available (251 aa)
	ENSTSYP00000019039	annotation not available (232 aa)
	PSMB6	Proteasome subunit beta. (242 aa)
	ENSTSYP00000021540	annotation not available (291 aa)
	ENSTSYP00000024485	annotation not available (234 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	ENSTSYP00000028450	annotation not available (227 aa)
	ENSTSYP00000028770	annotation not available (118 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	LOC103262238	Proteasome subunit alpha type. (261 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)
	PSMB5	Proteasome subunit beta. (263 aa)
	ENSTSYP00000032718	annotation not available (175 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	ENSTSYP00000034042	annotation not available (110 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTSYP00000009770	ENSTSYP00000015668	ENSTSYP00000009770	ENSTSYP00000015668	annotation not available	annotation not available	0.980
ENSTSYP00000009770	ENSTSYP00000019039	ENSTSYP00000009770	ENSTSYP00000019039	annotation not available	annotation not available	0.993
ENSTSYP00000009770	ENSTSYP00000021540	ENSTSYP00000009770	ENSTSYP00000021540	annotation not available	annotation not available	0.992
ENSTSYP00000009770	ENSTSYP00000024485	ENSTSYP00000009770	ENSTSYP00000024485	annotation not available	annotation not available	0.980
ENSTSYP00000009770	ENSTSYP00000028450	ENSTSYP00000009770	ENSTSYP00000028450	annotation not available	annotation not available	0.992
ENSTSYP00000009770	ENSTSYP00000028770	ENSTSYP00000009770	ENSTSYP00000028770	annotation not available	annotation not available	0.984
ENSTSYP00000009770	ENSTSYP00000032718	ENSTSYP00000009770	ENSTSYP00000032718	annotation not available	annotation not available	0.984
ENSTSYP00000009770	ENSTSYP00000034042	ENSTSYP00000009770	ENSTSYP00000034042	annotation not available	annotation not available	0.984
ENSTSYP00000009770	LOC103262238	ENSTSYP00000009770	ENSTSYP00000030925	annotation not available	Proteasome subunit alpha type.	0.992
ENSTSYP00000009770	PSMA1	ENSTSYP00000009770	ENSTSYP00000003531	annotation not available	Proteasome subunit alpha type.	0.980
ENSTSYP00000009770	PSMA2	ENSTSYP00000009770	ENSTSYP00000031828	annotation not available	Proteasome subunit alpha type.	0.993
ENSTSYP00000009770	PSMA3	ENSTSYP00000009770	ENSTSYP00000033173	annotation not available	Proteasome subunit alpha type.	0.997
ENSTSYP00000009770	PSMA4	ENSTSYP00000009770	ENSTSYP00000004635	annotation not available	Proteasome subunit alpha type.	0.992
ENSTSYP00000009770	PSMA5	ENSTSYP00000009770	ENSTSYP00000000711	annotation not available	Proteasome subunit alpha type.	0.992
ENSTSYP00000009770	PSMA6	ENSTSYP00000009770	ENSTSYP00000014252	annotation not available	Proteasome subunit alpha type.	0.996
ENSTSYP00000009770	PSMA7	ENSTSYP00000009770	ENSTSYP00000010021	annotation not available	Proteasome endopeptidase complex.	0.995
ENSTSYP00000009770	PSMA8	ENSTSYP00000009770	ENSTSYP00000006023	annotation not available	Proteasome subunit alpha type.	0.995
ENSTSYP00000009770	PSMB1	ENSTSYP00000009770	ENSTSYP00000001400	annotation not available	Proteasome subunit beta.	0.996
ENSTSYP00000009770	PSMB10	ENSTSYP00000009770	ENSTSYP00000026504	annotation not available	Proteasome subunit beta.	0.991
ENSTSYP00000009770	PSMB2	ENSTSYP00000009770	ENSTSYP00000005163	annotation not available	Proteasome subunit beta.	0.997