STRINGSTRING
SMC3 SMC3 NDNF NDNF CTCF CTCF ZFP36L1 ZFP36L1 PRRT2 PRRT2 RAD21 RAD21 CDK12 CDK12 RELN RELN SPI1 SPI1 SCN8A SCN8A ARF1 ARF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMC3Structural maintenance of chromosomes protein. (1208 aa)
NDNFProtein NDNF. (566 aa)
CTCFTranscriptional repressor CTCF isoform X1. (727 aa)
ZFP36L1mRNA decay activator protein ZFP36L1. (338 aa)
PRRT2Proline-rich transmembrane protein 2 isoform X1. (375 aa)
RAD21Double-strand-break repair protein rad21 homolog. (632 aa)
CDK12Cyclin-dependent kinase 12 isoform X2. (1481 aa)
RELNReelin. (3443 aa)
SPI1LOW QUALITY PROTEIN: transcription factor PU.1. (259 aa)
SCN8ASodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient. (1980 aa)
ARF1ADP-ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
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