10 items (Carlito syrichta) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMA5	Proteasome subunit alpha type. (241 aa)
	PSMA1	Proteasome subunit alpha type. (264 aa)
	PSMA4	Proteasome subunit alpha type. (179 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	ENSTSYP00000019039	annotation not available (232 aa)
	LOC103262238	Proteasome subunit alpha type. (261 aa)
	ENSTSYP00000028450	annotation not available (227 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMA2	Proteasome subunit alpha type. (234 aa)

Your Current Organism:

Carlito syrichta

NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSTSYP00000019039	ENSTSYP00000028450	ENSTSYP00000019039	ENSTSYP00000028450	annotation not available	annotation not available	0.995
ENSTSYP00000019039	LOC103262238	ENSTSYP00000019039	ENSTSYP00000030925	annotation not available	Proteasome subunit alpha type.	0.996
ENSTSYP00000019039	PSMA1	ENSTSYP00000019039	ENSTSYP00000003531	annotation not available	Proteasome subunit alpha type.	0.993
ENSTSYP00000019039	PSMA3	ENSTSYP00000019039	ENSTSYP00000033173	annotation not available	Proteasome subunit alpha type.	0.998
ENSTSYP00000019039	PSMA4	ENSTSYP00000019039	ENSTSYP00000004635	annotation not available	Proteasome subunit alpha type.	0.996
ENSTSYP00000019039	PSMA5	ENSTSYP00000019039	ENSTSYP00000000711	annotation not available	Proteasome subunit alpha type.	0.995
ENSTSYP00000019039	PSMA6	ENSTSYP00000019039	ENSTSYP00000014252	annotation not available	Proteasome subunit alpha type.	0.998
ENSTSYP00000019039	PSMA8	ENSTSYP00000019039	ENSTSYP00000006023	annotation not available	Proteasome subunit alpha type.	0.996
ENSTSYP00000028450	ENSTSYP00000019039	ENSTSYP00000028450	ENSTSYP00000019039	annotation not available	annotation not available	0.995
ENSTSYP00000028450	LOC103262238	ENSTSYP00000028450	ENSTSYP00000030925	annotation not available	Proteasome subunit alpha type.	0.995
ENSTSYP00000028450	PSMA1	ENSTSYP00000028450	ENSTSYP00000003531	annotation not available	Proteasome subunit alpha type.	0.993
ENSTSYP00000028450	PSMA2	ENSTSYP00000028450	ENSTSYP00000031828	annotation not available	Proteasome subunit alpha type.	0.995
ENSTSYP00000028450	PSMA3	ENSTSYP00000028450	ENSTSYP00000033173	annotation not available	Proteasome subunit alpha type.	0.998
ENSTSYP00000028450	PSMA4	ENSTSYP00000028450	ENSTSYP00000004635	annotation not available	Proteasome subunit alpha type.	0.995
ENSTSYP00000028450	PSMA6	ENSTSYP00000028450	ENSTSYP00000014252	annotation not available	Proteasome subunit alpha type.	0.998
ENSTSYP00000028450	PSMA8	ENSTSYP00000028450	ENSTSYP00000006023	annotation not available	Proteasome subunit alpha type.	0.994
LOC103262238	ENSTSYP00000019039	ENSTSYP00000030925	ENSTSYP00000019039	Proteasome subunit alpha type.	annotation not available	0.996
LOC103262238	ENSTSYP00000028450	ENSTSYP00000030925	ENSTSYP00000028450	Proteasome subunit alpha type.	annotation not available	0.995
LOC103262238	PSMA1	ENSTSYP00000030925	ENSTSYP00000003531	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.995
LOC103262238	PSMA2	ENSTSYP00000030925	ENSTSYP00000031828	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.997