14 items (Methylocystis sp. SC2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	BN69_0595	Conserved hypothetical protein. (392 aa)
	BN69_0596	40-residue YVTN family beta-propeller repeat protein. (317 aa)
	BN69_0597	ABC transporter related protein. (248 aa)
	BN69_0598	ABC-2 type transporter. (282 aa)
	BN69_1206	Conserved hypothetical protein. (115 aa)
	BN69_1359	Conserved hypothetical protein. (202 aa)
	BN69_1360	Rhodanese domain protein. (188 aa)
	BN69_1361	Extracellular solute-binding protein family 3. (300 aa)
	BN69_1362	Putative cytochrome c protein. (169 aa)
	BN69_1364	Putative metallo-beta-lactamase family protein. (307 aa)
	BN69_2904	Hypothetical protein. (175 aa)
	BN69_3264	Polyketide cyclase/dehydrase. (183 aa)
	BN69_3265	Polyketide cyclase/dehydrase. (194 aa)
	BN69_3266	40-residue YVTN family beta-propeller repeat protein. (273 aa)

Your Current Organism:

Methylocystis sp. SC2

NCBI taxonomy Id: 187303
Other names: M. sp. SC2

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
BN69_0595	BN69_0596	Conserved hypothetical protein.	40-residue YVTN family beta-propeller repeat protein.	0.909
BN69_0595	BN69_0597	Conserved hypothetical protein.	ABC transporter related protein.	0.859
BN69_0595	BN69_0598	Conserved hypothetical protein.	ABC-2 type transporter.	0.846
BN69_0595	BN69_1206	Conserved hypothetical protein.	Conserved hypothetical protein.	0.751
BN69_0595	BN69_1359	Conserved hypothetical protein.	Conserved hypothetical protein.	0.764
BN69_0595	BN69_1360	Conserved hypothetical protein.	Rhodanese domain protein.	0.797
BN69_0595	BN69_1361	Conserved hypothetical protein.	Extracellular solute-binding protein family 3.	0.751
BN69_0595	BN69_1362	Conserved hypothetical protein.	Putative cytochrome c protein.	0.767
BN69_0595	BN69_1364	Conserved hypothetical protein.	Putative metallo-beta-lactamase family protein.	0.640
BN69_0595	BN69_2904	Conserved hypothetical protein.	Hypothetical protein.	0.675
BN69_0595	BN69_3264	Conserved hypothetical protein.	Polyketide cyclase/dehydrase.	0.676
BN69_0595	BN69_3265	Conserved hypothetical protein.	Polyketide cyclase/dehydrase.	0.671
BN69_0595	BN69_3266	Conserved hypothetical protein.	40-residue YVTN family beta-propeller repeat protein.	0.806
BN69_0596	BN69_0595	40-residue YVTN family beta-propeller repeat protein.	Conserved hypothetical protein.	0.909
BN69_0596	BN69_0597	40-residue YVTN family beta-propeller repeat protein.	ABC transporter related protein.	0.887
BN69_0596	BN69_0598	40-residue YVTN family beta-propeller repeat protein.	ABC-2 type transporter.	0.857
BN69_0596	BN69_1206	40-residue YVTN family beta-propeller repeat protein.	Conserved hypothetical protein.	0.723
BN69_0596	BN69_1359	40-residue YVTN family beta-propeller repeat protein.	Conserved hypothetical protein.	0.726
BN69_0596	BN69_1360	40-residue YVTN family beta-propeller repeat protein.	Rhodanese domain protein.	0.774
BN69_0596	BN69_1361	40-residue YVTN family beta-propeller repeat protein.	Extracellular solute-binding protein family 3.	0.717