STRINGSTRING
A0A317XEA2 A0A317XEA2 A0A317XEY6 A0A317XEY6 A0A317XFT1 A0A317XFT1 A0A317XG53 A0A317XG53 A0A317XGD8 A0A317XGD8 A0A317XGT7 A0A317XGT7 A0A317XGT8 A0A317XGT8 NOP7 NOP7 A0A317XH59 A0A317XH59 A0A317XHD5 A0A317XHD5 A0A317XHH0 A0A317XHH0 A0A317XHX4 A0A317XHX4 A0A317XI27 A0A317XI27 A0A317XIA0 A0A317XIA0 A0A317XIG8 A0A317XIG8 A0A317XIQ2 A0A317XIQ2 A0A317XIR5 A0A317XIR5 A0A317XIT2 A0A317XIT2 A0A317XIW7 A0A317XIW7 A0A317XJJ0 A0A317XJJ0 A0A317XK65 A0A317XK65 A0A317XKB0 A0A317XKB0 A0A317XKB4 A0A317XKB4 A0A317XKI8 A0A317XKI8 A0A317XKJ5 A0A317XKJ5 A0A317XKP7 A0A317XKP7 A0A317XKQ4 A0A317XKQ4 TIF6 TIF6 A0A317XKU6 A0A317XKU6 A0A317XLM4 A0A317XLM4 A0A317XLV5 A0A317XLV5 A0A317XLY2 A0A317XLY2 A0A317XLZ7 A0A317XLZ7 A0A317XMG2 A0A317XMG2 A0A317XMU4 A0A317XMU4 A0A317XNC7 A0A317XNC7 A0A317XNG7 A0A317XNG7 A0A317XNL1 A0A317XNL1 A0A317XNL9 A0A317XNL9 A0A317XP22 A0A317XP22 A0A317XP49 A0A317XP49 A0A317XPM0 A0A317XPM0 A0A317XPU4 A0A317XPU4 A0A317XPV3 A0A317XPV3 A0A317XQ98 A0A317XQ98 A0A317XQC2 A0A317XQC2 A0A317XQH3 A0A317XQH3 A0A317XQJ1 A0A317XQJ1 A0A317XQM0 A0A317XQM0 A0A317XQR0 A0A317XQR0 A0A317XQT2 A0A317XQT2 A0A317XQY9 A0A317XQY9 A0A317XR57 A0A317XR57 A0A317XRE9 A0A317XRE9 A0A317XRS3 A0A317XRS3 A0A317XRZ7 A0A317XRZ7 A0A317XS02 A0A317XS02 A0A317XS71 A0A317XS71 A0A317XSM4 A0A317XSM4 A0A317XSN6 A0A317XSN6 A0A317XSS8 A0A317XSS8 A0A317XT00 A0A317XT00 A0A317XT75 A0A317XT75 A0A317XTC8 A0A317XTC8 A0A317XTD5 A0A317XTD5 A0A317XTF1 A0A317XTF1 A0A317XTJ6 A0A317XTJ6 A0A317XTK6 A0A317XTK6 A0A317XTK9 A0A317XTK9 A0A317XU41 A0A317XU41 A0A317XU70 A0A317XU70 A0A317XU84 A0A317XU84 A0A317XUC6 A0A317XUC6 A0A317XUD7 A0A317XUD7 A0A317XUF3 A0A317XUF3 A0A317XUM5 A0A317XUM5 A0A317XV36 A0A317XV36 A0A317XV74 A0A317XV74 A0A317XV78 A0A317XV78 A0A317XV96 A0A317XV96 ERB1 ERB1 A0A317XVP0 A0A317XVP0 A0A317XVQ3 A0A317XVQ3 A0A317XVQ6 A0A317XVQ6 A0A317XVY7 A0A317XVY7 SPB1 SPB1 BCV70DRAFT_886 BCV70DRAFT_886 A0A317XW45 A0A317XW45 A0A317XWA6 A0A317XWA6 A0A317XWD1 A0A317XWD1 YTM1 YTM1 A0A317XWL1 A0A317XWL1 A0A317XWM1 A0A317XWM1 A0A317XWW3 A0A317XWW3 A0A317XWY0 A0A317XWY0 A0A317XWZ3 A0A317XWZ3 A0A317XX07 A0A317XX07 A0A317XX44 A0A317XX44 A0A317XX50 A0A317XX50 A0A317XXA2 A0A317XXA2 A0A317XXC3 A0A317XXC3 A0A317XXI8 A0A317XXI8 A0A317XXS6 A0A317XXS6 A0A317XXX1 A0A317XXX1 A0A317XXY4 A0A317XXY4 A0A317XY04 A0A317XY04 NAT10 NAT10 A0A317XY59 A0A317XY59 A0A317XY76 A0A317XY76 A0A317XY77 A0A317XY77 A0A317XY82 A0A317XY82 A0A317XY91 A0A317XY91 A0A317XYB0 A0A317XYB0 A0A317XYH5 A0A317XYH5 A0A317XYN6 A0A317XYN6 A0A317XYR1 A0A317XYR1 A0A317XYY7 A0A317XYY7 A0A317XZ24 A0A317XZ24 A0A317XZ32 A0A317XZ32 A0A317XZ69 A0A317XZ69 A0A317XZB9 A0A317XZB9 A0A317XZE7 A0A317XZE7 A0A317XZG1 A0A317XZG1 A0A317XZR9 A0A317XZR9 A0A317XZT3 A0A317XZT3 A0A317Y066 A0A317Y066 A0A317Y0M9 A0A317Y0M9 A0A317Y0R7 A0A317Y0R7 A0A317Y114 A0A317Y114 A0A317Y1Y5 A0A317Y1Y5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A317XEA2Utp11-domain-containing protein. (388 aa)
A0A317XEY6Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (679 aa)
A0A317XFT1U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (718 aa)
A0A317XG53Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (351 aa)
A0A317XGD8Ebp2-domain-containing protein. (582 aa)
A0A317XGT760S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (552 aa)
A0A317XGT8RRM domain-containing protein. (418 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (693 aa)
A0A317XH59DEAD-domain-containing protein. (824 aa)
A0A317XHD5EXOSC1 domain-containing protein. (294 aa)
A0A317XHH0Putative LSG1-large-subunit GTPase. (730 aa)
A0A317XHX4WD40 repeat-like protein. (570 aa)
A0A317XI27S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (693 aa)
A0A317XIA0Nucleic acid-binding protein. (1579 aa)
A0A317XIG8KH_dom_type_1 domain-containing protein. (414 aa)
A0A317XIQ2Ribosomal protein S5 domain 2-like protein. (300 aa)
A0A317XIR5TRAUB-domain-containing protein. (583 aa)
A0A317XIT2NOC3p-domain-containing protein. (1110 aa)
A0A317XIW7C2H2-type domain-containing protein. (128 aa)
A0A317XJJ0DEAD-domain-containing protein. (688 aa)
A0A317XK65RRM domain-containing protein. (699 aa)
A0A317XKB0Putative HAS1-helicase associated with Set1p; Belongs to the DEAD box helicase family. (568 aa)
A0A317XKB4Beta-transducin. (1085 aa)
A0A317XKI8Putative RSA4-WD-repeat protein. (581 aa)
A0A317XKJ5Uncharacterized protein. (534 aa)
A0A317XKP7P-loop containing nucleoside triphosphate hydrolase protein. (1717 aa)
A0A317XKQ4Uncharacterized protein. (433 aa)
TIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family. (246 aa)
A0A317XKU6Nep1-domain-containing protein. (377 aa)
A0A317XLM4RNA-binding domain-containing protein. (1077 aa)
A0A317XLV5RRM domain-containing protein. (766 aa)
A0A317XLY2Nop52-domain-containing protein. (493 aa)
A0A317XLZ7Uncharacterized protein. (571 aa)
A0A317XMG2Uncharacterized protein. (729 aa)
A0A317XMU4WD40 repeat-like protein. (757 aa)
A0A317XNC7Uncharacterized protein. (454 aa)
A0A317XNG7Putative NSA2-involved in biogenesis of ribosomal large subunit. (262 aa)
A0A317XNL1Putative DIS3 3`-5` exoribonuclease required for 3` end formation of 5.8S rRNA; Belongs to the RNR ribonuclease family. (1027 aa)
A0A317XNL9ARM repeat-containing protein. (945 aa)
A0A317XP22Fcf2-domain-containing protein. (332 aa)
A0A317XP49Uncharacterized protein. (312 aa)
A0A317XPM0DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (641 aa)
A0A317XPU4BP28CT domain-containing protein. (2312 aa)
A0A317XPV3RNA helicase. (827 aa)
A0A317XQ98Uncharacterized protein. (124 aa)
A0A317XQC2DEAD-domain-containing protein. (902 aa)
A0A317XQH3Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A0A317XQJ1DRIM domain-containing protein. (3088 aa)
A0A317XQM0Ribosomal protein L1. (367 aa)
A0A317XQR0RNase_PH domain-containing protein. (322 aa)
A0A317XQT2ARM repeat-containing protein. (1049 aa)
A0A317XQY9Putative DBP3-putative RNA helicase required for pre-rRNA processing; Belongs to the DEAD box helicase family. (560 aa)
A0A317XR57DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (579 aa)
A0A317XRE9NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (743 aa)
A0A317XRS3NUC189-domain-containing protein. (889 aa)
A0A317XRZ7Putative IMP4-component of the U3 small nucleolar ribonucleo protein. (289 aa)
A0A317XS02Putative RRP45-exosome complex exonuclease. (313 aa)
A0A317XS71KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (402 aa)
A0A317XSM4Nrap-domain-containing protein. (1373 aa)
A0A317XSN6Putative exosome complex exonuclease rrp41. (270 aa)
A0A317XSS8P-loop containing nucleoside triphosphate hydrolase protein. (1623 aa)
A0A317XT00Fcf1-domain-containing protein. (209 aa)
A0A317XT75CBF-domain-containing protein. (852 aa)
A0A317XTC8Putative IMP3-component of the U3 small nucleolar ribonucleo protein. (182 aa)
A0A317XTD5NUC173-domain-containing protein. (1503 aa)
A0A317XTF1CBF-domain-containing protein. (1204 aa)
A0A317XTJ6RNA helicase. (1005 aa)
A0A317XTK6Putative SIK1-involved in pre-rRNA processing. (534 aa)
A0A317XTK9WD40 repeat-like protein. (497 aa)
A0A317XU41Uncharacterized protein. (247 aa)
A0A317XU70Uncharacterized protein. (361 aa)
A0A317XU84WD40 repeat-like protein. (872 aa)
A0A317XUC6Uncharacterized protein. (896 aa)
A0A317XUD7RNA-binding domain-containing protein. (932 aa)
A0A317XUF3Creatinase/aminopeptidase. (372 aa)
A0A317XUM5Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (724 aa)
A0A317XV36Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (879 aa)
A0A317XV74Putative BMS1-GTP-binding protein required for distinct steps of 40S ribosome biogenesis. (1156 aa)
A0A317XV78Putative periodic tryptophan protein PWP2. (894 aa)
A0A317XV96Utp14-domain-containing protein. (1053 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (944 aa)
A0A317XVP0ATP-dependent RNA helicase DBP10. (1188 aa)
A0A317XVQ3P-loop containing nucleoside triphosphate hydrolase protein. (840 aa)
A0A317XVQ6Uncharacterized protein. (369 aa)
A0A317XVY7P-loop containing nucleoside triphosphate hydrolase protein. (950 aa)
SPB1AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (928 aa)
BCV70DRAFT_886WD40 repeat-like protein. (573 aa)
A0A317XW45Noc2-domain-containing protein. (743 aa)
A0A317XWA6P-loop containing nucleoside triphosphate hydrolase protein. (945 aa)
A0A317XWD1Brix-domain-containing protein. (320 aa)
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (537 aa)
A0A317XWL1RIX1 domain-containing protein. (947 aa)
A0A317XWM1Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (311 aa)
A0A317XWW360S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
A0A317XWY0P-loop containing nucleoside triphosphate hydrolase protein. (947 aa)
A0A317XWZ3Uncharacterized protein. (1117 aa)
A0A317XX07Uncharacterized protein. (360 aa)
A0A317XX44Ipi1_N domain-containing protein. (776 aa)
A0A317XX50BING4CT-domain-containing protein. (645 aa)
A0A317XXA2Brix-domain-containing protein. (452 aa)
A0A317XXC3Uncharacterized protein. (1294 aa)
A0A317XXI8WD40 repeat-like protein. (1227 aa)
A0A317XXS6Sas10 domain-containing protein. (799 aa)
A0A317XXX1Uncharacterized protein. (579 aa)
A0A317XXY4WD40 repeat-like protein. (725 aa)
A0A317XY04WD40 repeat-like protein. (1047 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1202 aa)
A0A317XY59Brix-domain-containing protein. (447 aa)
A0A317XY76Uncharacterized protein. (1220 aa)
A0A317XY77P-loop containing nucleoside triphosphate hydrolase protein. (711 aa)
A0A317XY82WD40 repeat-like protein. (564 aa)
A0A317XY91WD40 repeat-like protein. (606 aa)
A0A317XYB0Nucleolar protein 58. (589 aa)
A0A317XYH5Uncharacterized protein. (258 aa)
A0A317XYN6GN3L_Grn1 domain-containing protein. (667 aa)
A0A317XYR1RNase_PH domain-containing protein. (314 aa)
A0A317XYY7Ribosomal protein S5 domain 2-like protein. (384 aa)
A0A317XZ24WD40 repeat-like protein. (1079 aa)
A0A317XZ32Protein MAK16; Belongs to the MAK16 family. (341 aa)
A0A317XZ69TRASH domain-containing protein. (185 aa)
A0A317XZB9Uncharacterized protein. (380 aa)
A0A317XZE7Fibrillarin. (337 aa)
A0A317XZG1DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (518 aa)
A0A317XZR9Mpp10-domain-containing protein. (1001 aa)
A0A317XZT3Nop14-like protein. (958 aa)
A0A317Y066Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (478 aa)
A0A317Y0M9Uncharacterized protein. (967 aa)
A0A317Y0R7DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1529 aa)
A0A317Y114Uncharacterized protein. (1088 aa)
A0A317Y1Y518S rRNA biogenesis protein. (425 aa)
Your Current Organism:
Testicularia cyperi
NCBI taxonomy Id: 1882483
Other names: T. cyperi
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