STRINGSTRING
TSR3 TSR3 A0A317XXS6 A0A317XXS6 A0A317XY04 A0A317XY04 NAT10 NAT10 A0A317XYB0 A0A317XYB0 A0A317XYF0 A0A317XYF0 A0A317XYX2 A0A317XYX2 A0A317XZ24 A0A317XZ24 A0A317XZR9 A0A317XZR9 A0A317XZS6 A0A317XZS6 A0A317XZT3 A0A317XZT3 A0A317Y0M9 A0A317Y0M9 A0A317Y1Y5 A0A317Y1Y5 A0A317XEA2 A0A317XEA2 A0A317XEY6 A0A317XEY6 A0A317XFA5 A0A317XFA5 A0A317XFJ8 A0A317XFJ8 A0A317XG53 A0A317XG53 A0A317XI81 A0A317XI81 A0A317XIA0 A0A317XIA0 A0A317XIN3 A0A317XIN3 A0A317XIR5 A0A317XIR5 A0A317XJK4 A0A317XJK4 A0A317XKC4 A0A317XKC4 A0A317XKP7 A0A317XKP7 A0A317XKQ4 A0A317XKQ4 A0A317XLL1 A0A317XLL1 A0A317XMU4 A0A317XMU4 A0A317XN94 A0A317XN94 A0A317XNP3 A0A317XNP3 A0A317XNY2 A0A317XNY2 A0A317XP08 A0A317XP08 A0A317XP22 A0A317XP22 A0A317XP67 A0A317XP67 A0A317XPU4 A0A317XPU4 A0A317XQH3 A0A317XQH3 A0A317XR15 A0A317XR15 A0A317XR43 A0A317XR43 A0A317XR57 A0A317XR57 A0A317XRS3 A0A317XRS3 A0A317XS39 A0A317XS39 A0A317XS71 A0A317XS71 A0A317XSE3 A0A317XSE3 A0A317XSV2 A0A317XSV2 A0A317XT00 A0A317XT00 A0A317XT75 A0A317XT75 A0A317XTD5 A0A317XTD5 A0A317XTK9 A0A317XTK9 A0A317XU70 A0A317XU70 A0A317XU84 A0A317XU84 A0A317XUR3 A0A317XUR3 A0A317XV74 A0A317XV74 A0A317XV78 A0A317XV78 A0A317XV96 A0A317XV96 A0A317XVL5 A0A317XVL5 BCV70DRAFT_886 BCV70DRAFT_886 A0A317XW36 A0A317XW36 A0A317XWA6 A0A317XWA6 A0A317XWZ3 A0A317XWZ3 A0A317XX16 A0A317XX16 A0A317XX50 A0A317XX50 A0A317XXI8 A0A317XXI8
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TSR3Ribosome biogenesis protein TSR3; Ribosome biogenesis protein required for processing 35S pre- rRNA at site D; Belongs to the TSR3 family. (373 aa)
A0A317XXS6Sas10 domain-containing protein. (799 aa)
A0A317XY04WD40 repeat-like protein. (1047 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1202 aa)
A0A317XYB0Nucleolar protein 58. (589 aa)
A0A317XYF0Uncharacterized protein. (593 aa)
A0A317XYX2Uncharacterized protein. (636 aa)
A0A317XZ24WD40 repeat-like protein. (1079 aa)
A0A317XZR9Mpp10-domain-containing protein. (1001 aa)
A0A317XZS6Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family. (149 aa)
A0A317XZT3Nop14-like protein. (958 aa)
A0A317Y0M9Uncharacterized protein. (967 aa)
A0A317Y1Y518S rRNA biogenesis protein. (425 aa)
A0A317XEA2Utp11-domain-containing protein. (388 aa)
A0A317XEY6Putative ROK1-ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. (679 aa)
A0A317XFA5RIO domain-containing protein. (598 aa)
A0A317XFJ8Uncharacterized protein. (243 aa)
A0A317XG53Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (351 aa)
A0A317XI8140S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
A0A317XIA0Nucleic acid-binding protein. (1579 aa)
A0A317XIN3Uncharacterized protein. (232 aa)
A0A317XIR5TRAUB-domain-containing protein. (583 aa)
A0A317XJK4Putative PNO1 protein. (324 aa)
A0A317XKC440S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (211 aa)
A0A317XKP7P-loop containing nucleoside triphosphate hydrolase protein. (1717 aa)
A0A317XKQ4Uncharacterized protein. (433 aa)
A0A317XLL1Adenylate kinase isoenzyme 6 homolog; Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates. Has also ATPase activity. May be involved in rRNA maturation and transcription regulation. (217 aa)
A0A317XMU4WD40 repeat-like protein. (757 aa)
A0A317XN94rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (228 aa)
A0A317XNP3Trm112p-domain-containing protein. (129 aa)
A0A317XNY2Krr1-domain-containing protein. (787 aa)
A0A317XP08Uncharacterized protein. (514 aa)
A0A317XP22Fcf2-domain-containing protein. (332 aa)
A0A317XP67Uncharacterized protein. (518 aa)
A0A317XPU4BP28CT domain-containing protein. (2312 aa)
A0A317XQH3Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A0A317XR15Bud-site selection protein. (644 aa)
A0A317XR43Putative BUD23-protein. (298 aa)
A0A317XR57DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (579 aa)
A0A317XRS3NUC189-domain-containing protein. (889 aa)
A0A317XS39Uncharacterized protein. (341 aa)
A0A317XS71KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (402 aa)
A0A317XSE3Bystin-domain-containing protein. (536 aa)
A0A317XSV2Sm domain-containing protein. (91 aa)
A0A317XT00Fcf1-domain-containing protein. (209 aa)
A0A317XT75CBF-domain-containing protein. (852 aa)
A0A317XTD5NUC173-domain-containing protein. (1503 aa)
A0A317XTK9WD40 repeat-like protein. (497 aa)
A0A317XU70Uncharacterized protein. (361 aa)
A0A317XU84WD40 repeat-like protein. (872 aa)
A0A317XUR3DUF663-domain-containing protein. (992 aa)
A0A317XV74Putative BMS1-GTP-binding protein required for distinct steps of 40S ribosome biogenesis. (1156 aa)
A0A317XV78Putative periodic tryptophan protein PWP2. (894 aa)
A0A317XV96Utp14-domain-containing protein. (1053 aa)
A0A317XVL5RIO1-domain-containing protein. (779 aa)
BCV70DRAFT_886WD40 repeat-like protein. (573 aa)
A0A317XW36U6 snRNA-associated Sm-like protein LSm7. (145 aa)
A0A317XWA6P-loop containing nucleoside triphosphate hydrolase protein. (945 aa)
A0A317XWZ3Uncharacterized protein. (1117 aa)
A0A317XX16DUF947-domain-containing protein. (276 aa)
A0A317XX50BING4CT-domain-containing protein. (645 aa)
A0A317XXI8WD40 repeat-like protein. (1227 aa)
Your Current Organism:
Testicularia cyperi
NCBI taxonomy Id: 1882483
Other names: T. cyperi
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