(7 nodes) Multimeric ribonuclease P complex network (Testicularia cyperi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317XL06	Uncharacterized protein. (267 aa)
	A0A317XNY2	Krr1-domain-containing protein. (787 aa)
	A0A317XP67	Uncharacterized protein. (518 aa)
	A0A317XSJ2	POP1-domain-containing protein. (1068 aa)
	A0A317XU83	Uncharacterized protein. (190 aa)
	A0A317XYX2	Uncharacterized protein. (636 aa)
	A0A317XZD4	PHP domain-like protein. (402 aa)

Your Current Organism:

Testicularia cyperi

NCBI taxonomy Id: 1882483
Other names: T. cyperi

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317XL06	A0A317XNY2	Uncharacterized protein.	Krr1-domain-containing protein.	0.896
A0A317XL06	A0A317XP67	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A317XL06	A0A317XSJ2	Uncharacterized protein.	POP1-domain-containing protein.	0.999
A0A317XL06	A0A317XU83	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A317XL06	A0A317XYX2	Uncharacterized protein.	Uncharacterized protein.	0.939
A0A317XL06	A0A317XZD4	Uncharacterized protein.	PHP domain-like protein.	0.999
A0A317XNY2	A0A317XL06	Krr1-domain-containing protein.	Uncharacterized protein.	0.896
A0A317XNY2	A0A317XSJ2	Krr1-domain-containing protein.	POP1-domain-containing protein.	0.913
A0A317XNY2	A0A317XU83	Krr1-domain-containing protein.	Uncharacterized protein.	0.840
A0A317XNY2	A0A317XZD4	Krr1-domain-containing protein.	PHP domain-like protein.	0.907
A0A317XP67	A0A317XL06	Uncharacterized protein.	Uncharacterized protein.	0.949
A0A317XP67	A0A317XSJ2	Uncharacterized protein.	POP1-domain-containing protein.	0.957
A0A317XP67	A0A317XU83	Uncharacterized protein.	Uncharacterized protein.	0.840
A0A317XP67	A0A317XZD4	Uncharacterized protein.	PHP domain-like protein.	0.954
A0A317XSJ2	A0A317XL06	POP1-domain-containing protein.	Uncharacterized protein.	0.999
A0A317XSJ2	A0A317XNY2	POP1-domain-containing protein.	Krr1-domain-containing protein.	0.913
A0A317XSJ2	A0A317XP67	POP1-domain-containing protein.	Uncharacterized protein.	0.957
A0A317XSJ2	A0A317XU83	POP1-domain-containing protein.	Uncharacterized protein.	0.994
A0A317XSJ2	A0A317XYX2	POP1-domain-containing protein.	Uncharacterized protein.	0.890
A0A317XSJ2	A0A317XZD4	POP1-domain-containing protein.	PHP domain-like protein.	0.999