18 items (Testicularia cyperi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A317XT00	Fcf1-domain-containing protein. (209 aa)
	A0A317XEA2	Utp11-domain-containing protein. (388 aa)
	A0A317XFT1	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (718 aa)
	A0A317XIA0	Nucleic acid-binding protein. (1579 aa)
	A0A317XIR5	TRAUB-domain-containing protein. (583 aa)
	A0A317XJZ3	RNA helicase. (943 aa)
	A0A317XKP7	P-loop containing nucleoside triphosphate hydrolase protein. (1717 aa)
	A0A317XMU4	WD40 repeat-like protein. (757 aa)
	A0A317XQJ1	DRIM domain-containing protein. (3088 aa)
	A0A317XRS3	NUC189-domain-containing protein. (889 aa)
	A0A317XS71	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (402 aa)
	A0A317XTK9	WD40 repeat-like protein. (497 aa)
	A0A317XV96	Utp14-domain-containing protein. (1053 aa)
	A0A317XWZ3	Uncharacterized protein. (1117 aa)
	A0A317XX50	BING4CT-domain-containing protein. (645 aa)
	A0A317XXQ6	Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family. (259 aa)
	A0A317XXS6	Sas10 domain-containing protein. (799 aa)
	A0A317XZB9	Uncharacterized protein. (380 aa)

Your Current Organism:

Testicularia cyperi

NCBI taxonomy Id: 1882483
Other names: T. cyperi

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A317XEA2	A0A317XFT1	Utp11-domain-containing protein.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.986
A0A317XEA2	A0A317XIA0	Utp11-domain-containing protein.	Nucleic acid-binding protein.	0.998
A0A317XEA2	A0A317XIR5	Utp11-domain-containing protein.	TRAUB-domain-containing protein.	0.994
A0A317XEA2	A0A317XJZ3	Utp11-domain-containing protein.	RNA helicase.	0.717
A0A317XEA2	A0A317XKP7	Utp11-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.970
A0A317XEA2	A0A317XMU4	Utp11-domain-containing protein.	WD40 repeat-like protein.	0.960
A0A317XEA2	A0A317XQJ1	Utp11-domain-containing protein.	DRIM domain-containing protein.	0.998
A0A317XEA2	A0A317XRS3	Utp11-domain-containing protein.	NUC189-domain-containing protein.	0.988
A0A317XEA2	A0A317XS71	Utp11-domain-containing protein.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
A0A317XEA2	A0A317XT00	Utp11-domain-containing protein.	Fcf1-domain-containing protein.	0.999
A0A317XEA2	A0A317XTK9	Utp11-domain-containing protein.	WD40 repeat-like protein.	0.999
A0A317XEA2	A0A317XV96	Utp11-domain-containing protein.	Utp14-domain-containing protein.	0.995
A0A317XEA2	A0A317XWZ3	Utp11-domain-containing protein.	Uncharacterized protein.	0.982
A0A317XEA2	A0A317XX50	Utp11-domain-containing protein.	BING4CT-domain-containing protein.	0.999
A0A317XEA2	A0A317XXS6	Utp11-domain-containing protein.	Sas10 domain-containing protein.	0.999
A0A317XEA2	A0A317XZB9	Utp11-domain-containing protein.	Uncharacterized protein.	0.949
A0A317XFT1	A0A317XEA2	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	Utp11-domain-containing protein.	0.986
A0A317XFT1	A0A317XIA0	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	Nucleic acid-binding protein.	0.992
A0A317XFT1	A0A317XIR5	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	TRAUB-domain-containing protein.	0.749
A0A317XFT1	A0A317XJZ3	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	RNA helicase.	0.756