STRINGSTRING
A0A317XI22 A0A317XI22 A0A317XIC8 A0A317XIC8 A0A317XQ50 A0A317XQ50 A0A317XTN4 A0A317XTN4 FEN1 FEN1 A0A317XVK0 A0A317XVK0 A0A317XW93 A0A317XW93 A0A317XWW6 A0A317XWW6 A0A317XXP5 A0A317XXP5 A0A317XYR6 A0A317XYR6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A317XI22DNA repair exonuclease. (892 aa)
A0A317XIC8DNA repair exonuclease. (892 aa)
A0A317XQ50PIN domain-like protein. (696 aa)
A0A317XTN4Uncharacterized protein. (863 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (385 aa)
A0A317XVK0DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (640 aa)
A0A317XW93SPOC domain-like protein. (685 aa)
A0A317XWW6SPOC domain-like protein. (845 aa)
A0A317XXP5TPR-like protein. (1361 aa)
A0A317XYR6Putative RAD50-DNA repair protein. (1319 aa)
Your Current Organism:
Testicularia cyperi
NCBI taxonomy Id: 1882483
Other names: T. cyperi
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