(5 nodes) Translation protein SH3-like domain superfamily, and Structural constituent of ribosome network (Bradyrhizobium sp. OK095)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rplS	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (127 aa)
	rpsP	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. (110 aa)
	rpmA	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. (89 aa)
	rplU	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (130 aa)
	rpsI	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. (159 aa)

Your Current Organism:

Bradyrhizobium sp. OK095

NCBI taxonomy Id: 1882760
Other names: B. sp. OK095

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplS	rplU	SAMN05443254_105347	SAMN05443254_105417	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.998
rplS	rpmA	SAMN05443254_105347	SAMN05443254_105416	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rplS	rpsI	SAMN05443254_105347	SAMN05443254_107401	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.998
rplS	rpsP	SAMN05443254_105347	SAMN05443254_105350	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplU	rplS	SAMN05443254_105417	SAMN05443254_105347	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rplU	rpmA	SAMN05443254_105417	SAMN05443254_105416	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.999
rplU	rpsI	SAMN05443254_105417	SAMN05443254_107401	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.997
rplU	rpsP	SAMN05443254_105417	SAMN05443254_105350	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.997
rpmA	rplS	SAMN05443254_105416	SAMN05443254_105347	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rpmA	rplU	SAMN05443254_105416	SAMN05443254_105417	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.999
rpmA	rpsI	SAMN05443254_105416	SAMN05443254_107401	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.998
rpmA	rpsP	SAMN05443254_105416	SAMN05443254_105350	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.998
rpsI	rplS	SAMN05443254_107401	SAMN05443254_105347	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rpsI	rplU	SAMN05443254_107401	SAMN05443254_105417	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rpsI	rpmA	SAMN05443254_107401	SAMN05443254_105416	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rpsI	rpsP	SAMN05443254_107401	SAMN05443254_105350	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rpsP	rplS	SAMN05443254_105350	SAMN05443254_105347	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.999
rpsP	rplU	SAMN05443254_105350	SAMN05443254_105417	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.997
rpsP	rpmA	SAMN05443254_105350	SAMN05443254_105416	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family.	0.998
rpsP	rpsI	SAMN05443254_105350	SAMN05443254_107401	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999